Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vps35Q9EQH3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps35Q9EQH3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps35Q9EQH3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps35Q9EQH3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Vps35Q9EQH3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.97■□□□□ 0.31
Vps35Q9EQH3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.97■□□□□ 0.31
Vps35Q9EQH3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps35Q9EQH3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vps35Q9EQH3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps35Q9EQH3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.96■□□□□ 0.31
Vps35Q9EQH3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.96■□□□□ 0.31
Vps35Q9EQH3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vps35Q9EQH3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vps35Q9EQH3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Vps35Q9EQH3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps35Q9EQH3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vps35Q9EQH3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps35Q9EQH3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vps35Q9EQH3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Vps35Q9EQH3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps35Q9EQH3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Vps35Q9EQH3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vps35Q9EQH3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Vps35Q9EQH3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vps35Q9EQH3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vps35Q9EQH3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.96■□□□□ 0.3
Vps35Q9EQH3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Vps35Q9EQH3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Gm11539-201ENSMUST00000119837 557 ntBASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Gm13436-201ENSMUST00000120418 567 ntBASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Gm13559-201ENSMUST00000120476 863 ntBASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Gm43799-201ENSMUST00000201845 579 ntBASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Gm7791-201ENSMUST00000219066 539 ntBASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps35Q9EQH3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps35Q9EQH3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Vps35Q9EQH3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Vps35Q9EQH3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps35Q9EQH3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Vps35Q9EQH3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms