Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne8Q9DC53 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne8Q9DC53 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne8Q9DC53 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.68■□□□□ 0.42
Cpne8Q9DC53 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne8Q9DC53 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne8Q9DC53 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cpne8Q9DC53 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne8Q9DC53 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne8Q9DC53 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne8Q9DC53 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne8Q9DC53 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.68■□□□□ 0.42
Cpne8Q9DC53 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cpne8Q9DC53 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cpne8Q9DC53 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.68■□□□□ 0.42
Cpne8Q9DC53 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne8Q9DC53 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Gm9731-201ENSMUST00000209480 747 ntBASIC17.67■□□□□ 0.42
Cpne8Q9DC53 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne8Q9DC53 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Gm715-201ENSMUST00000117865 831 ntBASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne8Q9DC53 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne8Q9DC53 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne8Q9DC53 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne8Q9DC53 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne8Q9DC53 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne8Q9DC53 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne8Q9DC53 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne8Q9DC53 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne8Q9DC53 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne8Q9DC53 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne8Q9DC53 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.65■□□□□ 0.42
Cpne8Q9DC53 Gm7791-201ENSMUST00000219066 539 ntBASIC17.65■□□□□ 0.42
Cpne8Q9DC53 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne8Q9DC53 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne8Q9DC53 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne8Q9DC53 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne8Q9DC53 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne8Q9DC53 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne8Q9DC53 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne8Q9DC53 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.65■□□□□ 0.42
Cpne8Q9DC53 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms