Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdc40Q9DC48 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdc40Q9DC48 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
Cdc40Q9DC48 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdc40Q9DC48 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.76■□□□□ 0.11
Cdc40Q9DC48 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Cdc40Q9DC48 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdc40Q9DC48 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdc40Q9DC48 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cdc40Q9DC48 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.76■□□□□ 0.11
Cdc40Q9DC48 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.76■□□□□ 0.11
Cdc40Q9DC48 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cdc40Q9DC48 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdc40Q9DC48 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdc40Q9DC48 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdc40Q9DC48 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdc40Q9DC48 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdc40Q9DC48 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 Gm4974-201ENSMUST00000209974 875 ntBASIC15.75■□□□□ 0.11
Cdc40Q9DC48 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cdc40Q9DC48 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdc40Q9DC48 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdc40Q9DC48 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdc40Q9DC48 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdc40Q9DC48 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdc40Q9DC48 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Cdc40Q9DC48 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Cdc40Q9DC48 Gm38027-201ENSMUST00000192315 235 ntBASIC15.74■□□□□ 0.11
Cdc40Q9DC48 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdc40Q9DC48 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Cdc40Q9DC48 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdc40Q9DC48 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdc40Q9DC48 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Cdc40Q9DC48 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.74■□□□□ 0.11
Cdc40Q9DC48 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdc40Q9DC48 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdc40Q9DC48 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdc40Q9DC48 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdc40Q9DC48 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Cdc40Q9DC48 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdc40Q9DC48 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdc40Q9DC48 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdc40Q9DC48 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdc40Q9DC48 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdc40Q9DC48 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.72■□□□□ 0.11
Cdc40Q9DC48 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdc40Q9DC48 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdc40Q9DC48 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdc40Q9DC48 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdc40Q9DC48 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.72■□□□□ 0.11
Cdc40Q9DC48 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdc40Q9DC48 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdc40Q9DC48 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms