Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc7Q9D541 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc7Q9D541 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc7Q9D541 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc7Q9D541 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc7Q9D541 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc7Q9D541 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc7Q9D541 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc7Q9D541 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc7Q9D541 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc7Q9D541 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc7Q9D541 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc7Q9D541 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Ccdc7Q9D541 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.83■□□□□ 0.77
Ccdc7Q9D541 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.83■□□□□ 0.77
Ccdc7Q9D541 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc7Q9D541 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Ccdc7Q9D541 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc7Q9D541 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Ccdc7Q9D541 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc7Q9D541 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.83■□□□□ 0.76
Ccdc7Q9D541 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.83■□□□□ 0.76
Ccdc7Q9D541 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc7Q9D541 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ccdc7Q9D541 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc7Q9D541 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.82■□□□□ 0.76
Ccdc7Q9D541 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc7Q9D541 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc7Q9D541 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ccdc7Q9D541 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.82■□□□□ 0.76
Ccdc7Q9D541 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ccdc7Q9D541 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc7Q9D541 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc7Q9D541 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc7Q9D541 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ccdc7Q9D541 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.81■□□□□ 0.76
Ccdc7Q9D541 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc7Q9D541 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc7Q9D541 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc7Q9D541 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc7Q9D541 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc7Q9D541 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc7Q9D541 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc7Q9D541 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc7Q9D541 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc7Q9D541 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.81■□□□□ 0.76
Ccdc7Q9D541 Gm20760-201ENSMUST00000179197 648 ntBASIC19.81■□□□□ 0.76
Ccdc7Q9D541 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc7Q9D541 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc7Q9D541 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ccdc7Q9D541 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc7Q9D541 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc7Q9D541 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc7Q9D541 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc7Q9D541 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc7Q9D541 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc7Q9D541 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc7Q9D541 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.8■□□□□ 0.76
Ccdc7Q9D541 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc7Q9D541 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.8■□□□□ 0.76
Ccdc7Q9D541 Mir1199-201ENSMUST00000117015 119 ntBASIC19.8■□□□□ 0.76
Ccdc7Q9D541 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc7Q9D541 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.8■□□□□ 0.76
Ccdc7Q9D541 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc7Q9D541 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc7Q9D541 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc7Q9D541 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc7Q9D541 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc7Q9D541 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc7Q9D541 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc7Q9D541 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc7Q9D541 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc7Q9D541 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc7Q9D541 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc7Q9D541 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc7Q9D541 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc7Q9D541 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.79■□□□□ 0.76
Ccdc7Q9D541 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.79■□□□□ 0.76
Ccdc7Q9D541 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc7Q9D541 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc7Q9D541 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc7Q9D541 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc7Q9D541 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc7Q9D541 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms