Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 Gm27437-201ENSMUST00000183429 107 ntBASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 Rassf8-202ENSMUST00000058538 1131 ntBASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Lysmd1Q9D0E3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Lysmd1Q9D0E3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd1Q9D0E3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd1Q9D0E3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Lysmd1Q9D0E3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Lysmd1Q9D0E3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd1Q9D0E3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd1Q9D0E3 Gm11764-201ENSMUST00000120221 623 ntBASIC18.14■□□□□ 0.49
Lysmd1Q9D0E3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Lysmd1Q9D0E3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd1Q9D0E3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd1Q9D0E3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd1Q9D0E3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd1Q9D0E3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Gm44430-201ENSMUST00000203376 995 ntBASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Gm18421-201ENSMUST00000204122 625 ntBASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd1Q9D0E3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd1Q9D0E3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.12■□□□□ 0.49
Lysmd1Q9D0E3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd1Q9D0E3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Lysmd1Q9D0E3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Lysmd1Q9D0E3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd1Q9D0E3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd1Q9D0E3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd1Q9D0E3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Lysmd1Q9D0E3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Lysmd1Q9D0E3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd1Q9D0E3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd1Q9D0E3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd1Q9D0E3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC18.11■□□□□ 0.49
Lysmd1Q9D0E3 Gm25948-201ENSMUST00000175334 112 ntBASIC18.11■□□□□ 0.49
Lysmd1Q9D0E3 Gm44450-201ENSMUST00000199528 114 ntBASIC18.11■□□□□ 0.49
Lysmd1Q9D0E3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.11■□□□□ 0.49
Lysmd1Q9D0E3 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.11■□□□□ 0.49
Lysmd1Q9D0E3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd1Q9D0E3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd1Q9D0E3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.11■□□□□ 0.49
Lysmd1Q9D0E3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd1Q9D0E3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Lysmd1Q9D0E3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd1Q9D0E3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd1Q9D0E3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd1Q9D0E3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd1Q9D0E3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Lysmd1Q9D0E3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Lysmd1Q9D0E3 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.11■□□□□ 0.49
Lysmd1Q9D0E3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd1Q9D0E3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd1Q9D0E3 Gm15222-202ENSMUST00000228667 1726 ntBASIC18.1■□□□□ 0.49
Lysmd1Q9D0E3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd1Q9D0E3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Lysmd1Q9D0E3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Lysmd1Q9D0E3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.1■□□□□ 0.49
Lysmd1Q9D0E3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.1■□□□□ 0.49
Lysmd1Q9D0E3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.1■□□□□ 0.49
Lysmd1Q9D0E3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.1■□□□□ 0.49
Lysmd1Q9D0E3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd1Q9D0E3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd1Q9D0E3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.1■□□□□ 0.49
Lysmd1Q9D0E3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.1■□□□□ 0.49
Lysmd1Q9D0E3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd1Q9D0E3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd1Q9D0E3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd1Q9D0E3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms