Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc3Q9CWU5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc3Q9CWU5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc3Q9CWU5 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc3Q9CWU5 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc3Q9CWU5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc3Q9CWU5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc3Q9CWU5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc3Q9CWU5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc3Q9CWU5 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc3Q9CWU5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc3Q9CWU5 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.27■□□□□ 0.2
Khdc3Q9CWU5 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc3Q9CWU5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.27■□□□□ 0.2
Khdc3Q9CWU5 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc3Q9CWU5 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc3Q9CWU5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc3Q9CWU5 Gm715-201ENSMUST00000117865 831 ntBASIC16.27■□□□□ 0.2
Khdc3Q9CWU5 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.27■□□□□ 0.2
Khdc3Q9CWU5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc3Q9CWU5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc3Q9CWU5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc3Q9CWU5 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Khdc3Q9CWU5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc3Q9CWU5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc3Q9CWU5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Khdc3Q9CWU5 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc3Q9CWU5 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Khdc3Q9CWU5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.27■□□□□ 0.19
Khdc3Q9CWU5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Khdc3Q9CWU5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Khdc3Q9CWU5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Khdc3Q9CWU5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.27■□□□□ 0.19
Khdc3Q9CWU5 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Khdc3Q9CWU5 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc3Q9CWU5 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc3Q9CWU5 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc3Q9CWU5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Khdc3Q9CWU5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc3Q9CWU5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc3Q9CWU5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc3Q9CWU5 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc3Q9CWU5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Khdc3Q9CWU5 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc3Q9CWU5 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.25■□□□□ 0.19
Khdc3Q9CWU5 Gm37025-201ENSMUST00000195159 829 ntBASIC16.25■□□□□ 0.19
Khdc3Q9CWU5 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Khdc3Q9CWU5 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc3Q9CWU5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc3Q9CWU5 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc3Q9CWU5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc3Q9CWU5 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc3Q9CWU5 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc3Q9CWU5 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 Timm23-208ENSMUST00000226683 750 ntBASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms