Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Lrrc40Q9CRC8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lrrc40Q9CRC8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Lrrc40Q9CRC8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lrrc40Q9CRC8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrrc40Q9CRC8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrrc40Q9CRC8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrrc40Q9CRC8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrrc40Q9CRC8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.84■□□□□ 0.29
Lrrc40Q9CRC8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Lrrc40Q9CRC8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrrc40Q9CRC8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrrc40Q9CRC8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.84■□□□□ 0.29
Lrrc40Q9CRC8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrrc40Q9CRC8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrrc40Q9CRC8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lrrc40Q9CRC8 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.83■□□□□ 0.29
Lrrc40Q9CRC8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lrrc40Q9CRC8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lrrc40Q9CRC8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lrrc40Q9CRC8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lrrc40Q9CRC8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Lrrc40Q9CRC8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lrrc40Q9CRC8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Lrrc40Q9CRC8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lrrc40Q9CRC8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lrrc40Q9CRC8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lrrc40Q9CRC8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Lrrc40Q9CRC8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc40Q9CRC8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc40Q9CRC8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Lrrc40Q9CRC8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc40Q9CRC8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc40Q9CRC8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc40Q9CRC8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc40Q9CRC8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc40Q9CRC8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc40Q9CRC8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc40Q9CRC8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc40Q9CRC8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc40Q9CRC8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc40Q9CRC8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc40Q9CRC8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc40Q9CRC8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc40Q9CRC8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc40Q9CRC8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc40Q9CRC8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.81■□□□□ 0.28
Lrrc40Q9CRC8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lrrc40Q9CRC8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lrrc40Q9CRC8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc40Q9CRC8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc40Q9CRC8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lrrc40Q9CRC8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Lrrc40Q9CRC8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms