Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RTRAFQ9CQE8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC13.87□□□□□ -0.19
RTRAFQ9CQE8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RTRAFQ9CQE8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTRAFQ9CQE8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RTRAFQ9CQE8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTRAFQ9CQE8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTRAFQ9CQE8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RTRAFQ9CQE8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTRAFQ9CQE8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTRAFQ9CQE8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTRAFQ9CQE8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTRAFQ9CQE8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTRAFQ9CQE8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTRAFQ9CQE8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.87□□□□□ -0.19
RTRAFQ9CQE8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
RTRAFQ9CQE8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
RTRAFQ9CQE8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.86□□□□□ -0.19
RTRAFQ9CQE8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTRAFQ9CQE8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RTRAFQ9CQE8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RTRAFQ9CQE8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTRAFQ9CQE8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.86□□□□□ -0.19
RTRAFQ9CQE8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RTRAFQ9CQE8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.86□□□□□ -0.19
RTRAFQ9CQE8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTRAFQ9CQE8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RTRAFQ9CQE8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RTRAFQ9CQE8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RTRAFQ9CQE8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTRAFQ9CQE8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTRAFQ9CQE8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTRAFQ9CQE8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RTRAFQ9CQE8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RTRAFQ9CQE8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RTRAFQ9CQE8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RTRAFQ9CQE8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
RTRAFQ9CQE8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RTRAFQ9CQE8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.83□□□□□ -0.19
RTRAFQ9CQE8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.83□□□□□ -0.19
RTRAFQ9CQE8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 139.6 ms