Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim16Q99PP9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim16Q99PP9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim16Q99PP9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Trim16Q99PP9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim16Q99PP9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.59■□□□□ 0.25
Trim16Q99PP9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Trim16Q99PP9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim16Q99PP9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim16Q99PP9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.59■□□□□ 0.25
Trim16Q99PP9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim16Q99PP9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim16Q99PP9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim16Q99PP9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim16Q99PP9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim16Q99PP9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim16Q99PP9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim16Q99PP9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim16Q99PP9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trim16Q99PP9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim16Q99PP9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim16Q99PP9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim16Q99PP9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim16Q99PP9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Trim16Q99PP9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim16Q99PP9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.58■□□□□ 0.24
Trim16Q99PP9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.58■□□□□ 0.24
Trim16Q99PP9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim16Q99PP9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim16Q99PP9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.58■□□□□ 0.24
Trim16Q99PP9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim16Q99PP9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim16Q99PP9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim16Q99PP9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim16Q99PP9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim16Q99PP9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim16Q99PP9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim16Q99PP9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim16Q99PP9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim16Q99PP9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim16Q99PP9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim16Q99PP9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim16Q99PP9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim16Q99PP9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Mir1199-201ENSMUST00000117015 119 ntBASIC16.57■□□□□ 0.24
Trim16Q99PP9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim16Q99PP9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.57■□□□□ 0.24
Trim16Q99PP9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trim16Q99PP9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Trim16Q99PP9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.56■□□□□ 0.24
Trim16Q99PP9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim16Q99PP9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.56■□□□□ 0.24
Trim16Q99PP9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim16Q99PP9 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.55■□□□□ 0.24
Trim16Q99PP9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim16Q99PP9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim16Q99PP9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.55■□□□□ 0.24
Trim16Q99PP9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim16Q99PP9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim16Q99PP9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim16Q99PP9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms