Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.64■□□□□ 0.25
Trim8Q99PJ2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim8Q99PJ2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim8Q99PJ2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim8Q99PJ2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim8Q99PJ2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim8Q99PJ2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim8Q99PJ2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim8Q99PJ2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim8Q99PJ2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim8Q99PJ2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trim8Q99PJ2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trim8Q99PJ2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trim8Q99PJ2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trim8Q99PJ2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim8Q99PJ2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim8Q99PJ2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim8Q99PJ2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim8Q99PJ2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim8Q99PJ2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Gm6576-201ENSMUST00000169678 883 ntBASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trim8Q99PJ2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim8Q99PJ2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Trim8Q99PJ2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim8Q99PJ2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim8Q99PJ2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim8Q99PJ2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim8Q99PJ2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim8Q99PJ2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms