Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh23Q99PF4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cdh23Q99PF4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh23Q99PF4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Cdh23Q99PF4 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Cdh23Q99PF4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh23Q99PF4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cdh23Q99PF4 Gm15173-201ENSMUST00000122049 433 ntBASIC17.29■□□□□ 0.36
Cdh23Q99PF4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh23Q99PF4 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh23Q99PF4 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh23Q99PF4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh23Q99PF4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.29■□□□□ 0.36
Cdh23Q99PF4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh23Q99PF4 Gm13418-201ENSMUST00000119097 944 ntBASIC17.28■□□□□ 0.36
Cdh23Q99PF4 Gm13312-201ENSMUST00000119631 718 ntBASIC17.28■□□□□ 0.36
Cdh23Q99PF4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh23Q99PF4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh23Q99PF4 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh23Q99PF4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cdh23Q99PF4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh23Q99PF4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cdh23Q99PF4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh23Q99PF4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh23Q99PF4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh23Q99PF4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.28■□□□□ 0.36
Cdh23Q99PF4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh23Q99PF4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cdh23Q99PF4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh23Q99PF4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh23Q99PF4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh23Q99PF4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh23Q99PF4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh23Q99PF4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh23Q99PF4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Cdh23Q99PF4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh23Q99PF4 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.27■□□□□ 0.36
Cdh23Q99PF4 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh23Q99PF4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh23Q99PF4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh23Q99PF4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh23Q99PF4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh23Q99PF4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh23Q99PF4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cdh23Q99PF4 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.27■□□□□ 0.35
Cdh23Q99PF4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdh23Q99PF4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cdh23Q99PF4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdh23Q99PF4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdh23Q99PF4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.26■□□□□ 0.35
Cdh23Q99PF4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.26■□□□□ 0.35
Cdh23Q99PF4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cdh23Q99PF4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.25■□□□□ 0.35
Cdh23Q99PF4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh23Q99PF4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh23Q99PF4 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.25■□□□□ 0.35
Cdh23Q99PF4 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.25■□□□□ 0.35
Cdh23Q99PF4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh23Q99PF4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh23Q99PF4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cdh23Q99PF4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.25■□□□□ 0.35
Cdh23Q99PF4 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.25■□□□□ 0.35
Cdh23Q99PF4 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh23Q99PF4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh23Q99PF4 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.25■□□□□ 0.35
Cdh23Q99PF4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh23Q99PF4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.25■□□□□ 0.35
Cdh23Q99PF4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh23Q99PF4 Gm13186-201ENSMUST00000118031 316 ntBASIC17.25■□□□□ 0.35
Cdh23Q99PF4 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh23Q99PF4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh23Q99PF4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.25■□□□□ 0.35
Cdh23Q99PF4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh23Q99PF4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh23Q99PF4 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh23Q99PF4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh23Q99PF4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh23Q99PF4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cdh23Q99PF4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh23Q99PF4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms