Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.55■□□□□ 0.24
Msh4Q99MT2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Msh4Q99MT2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh4Q99MT2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.54■□□□□ 0.24
Msh4Q99MT2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Msh4Q99MT2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.54■□□□□ 0.24
Msh4Q99MT2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.54■□□□□ 0.24
Msh4Q99MT2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Msh4Q99MT2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.54■□□□□ 0.24
Msh4Q99MT2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.54■□□□□ 0.24
Msh4Q99MT2 Gm4974-201ENSMUST00000209974 875 ntBASIC16.54■□□□□ 0.24
Msh4Q99MT2 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.54■□□□□ 0.24
Msh4Q99MT2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh4Q99MT2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Msh4Q99MT2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Msh4Q99MT2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Msh4Q99MT2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh4Q99MT2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Msh4Q99MT2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Msh4Q99MT2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh4Q99MT2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Msh4Q99MT2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Msh4Q99MT2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh4Q99MT2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Msh4Q99MT2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Msh4Q99MT2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Msh4Q99MT2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Msh4Q99MT2 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.53■□□□□ 0.24
Msh4Q99MT2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh4Q99MT2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh4Q99MT2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Msh4Q99MT2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh4Q99MT2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh4Q99MT2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh4Q99MT2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh4Q99MT2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Msh4Q99MT2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Msh4Q99MT2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh4Q99MT2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Msh4Q99MT2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Msh4Q99MT2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh4Q99MT2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh4Q99MT2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Msh4Q99MT2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh4Q99MT2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh4Q99MT2 Gm12085-201ENSMUST00000119263 940 ntBASIC16.52■□□□□ 0.24
Msh4Q99MT2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.52■□□□□ 0.24
Msh4Q99MT2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.52■□□□□ 0.24
Msh4Q99MT2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.52■□□□□ 0.24
Msh4Q99MT2 Gm30025-201ENSMUST00000218555 728 ntBASIC16.52■□□□□ 0.24
Msh4Q99MT2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh4Q99MT2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Msh4Q99MT2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Msh4Q99MT2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh4Q99MT2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.52■□□□□ 0.24
Msh4Q99MT2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Msh4Q99MT2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Msh4Q99MT2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Msh4Q99MT2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.52■□□□□ 0.23
Msh4Q99MT2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Msh4Q99MT2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Msh4Q99MT2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Msh4Q99MT2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Msh4Q99MT2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.52■□□□□ 0.23
Msh4Q99MT2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh4Q99MT2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh4Q99MT2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh4Q99MT2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh4Q99MT2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.51■□□□□ 0.23
Msh4Q99MT2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Msh4Q99MT2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh4Q99MT2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.51■□□□□ 0.23
Msh4Q99MT2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Msh4Q99MT2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh4Q99MT2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Msh4Q99MT2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Msh4Q99MT2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Msh4Q99MT2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Msh4Q99MT2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh4Q99MT2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Msh4Q99MT2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh4Q99MT2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Msh4Q99MT2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Msh4Q99MT2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh4Q99MT2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Msh4Q99MT2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh4Q99MT2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Msh4Q99MT2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Msh4Q99MT2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh4Q99MT2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Msh4Q99MT2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh4Q99MT2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh4Q99MT2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh4Q99MT2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.49■□□□□ 0.23
Msh4Q99MT2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh4Q99MT2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh4Q99MT2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Msh4Q99MT2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.49■□□□□ 0.23
Msh4Q99MT2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Msh4Q99MT2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms