Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Col25a1Q99MQ5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col25a1Q99MQ5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col25a1Q99MQ5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Col25a1Q99MQ5 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Col25a1Q99MQ5 Rarb-207ENSMUST00000225921 2756 ntBASIC17.55■□□□□ 0.4
Col25a1Q99MQ5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col25a1Q99MQ5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col25a1Q99MQ5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Gm24841-201ENSMUST00000158676 357 ntBASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col25a1Q99MQ5 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Gm13401-201ENSMUST00000117074 291 ntBASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Gm44357-201ENSMUST00000195897 142 ntBASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Gm19658-201ENSMUST00000196231 138 ntBASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Gm44367-201ENSMUST00000196836 138 ntBASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Gm44350-201ENSMUST00000197197 138 ntBASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Gm44390-201ENSMUST00000197533 144 ntBASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Gm44313-201ENSMUST00000198018 138 ntBASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Gm44486-201ENSMUST00000198508 138 ntBASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Gm44454-201ENSMUST00000198541 138 ntBASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Gm43767-201ENSMUST00000198933 381 ntBASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Gm44314-201ENSMUST00000199263 138 ntBASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Gm44394-201ENSMUST00000199558 138 ntBASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Gm44484-201ENSMUST00000199873 138 ntBASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Gm44466-201ENSMUST00000200264 138 ntBASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Gm44359-201ENSMUST00000200671 138 ntBASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col25a1Q99MQ5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.52■□□□□ 0.4
Col25a1Q99MQ5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col25a1Q99MQ5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col25a1Q99MQ5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col25a1Q99MQ5 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col25a1Q99MQ5 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col25a1Q99MQ5 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Col25a1Q99MQ5 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.52■□□□□ 0.4
Col25a1Q99MQ5 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col25a1Q99MQ5 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Col25a1Q99MQ5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col25a1Q99MQ5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col25a1Q99MQ5 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.52■□□□□ 0.4
Col25a1Q99MQ5 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.52■□□□□ 0.39
Col25a1Q99MQ5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col25a1Q99MQ5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Col25a1Q99MQ5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Col25a1Q99MQ5 Actl10-202ENSMUST00000226583 1501 ntBASIC17.52■□□□□ 0.39
Col25a1Q99MQ5 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col25a1Q99MQ5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col25a1Q99MQ5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col25a1Q99MQ5 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Col25a1Q99MQ5 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col25a1Q99MQ5 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.51■□□□□ 0.39
Col25a1Q99MQ5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col25a1Q99MQ5 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms