Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Chmp1aQ921W0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp1aQ921W0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp1aQ921W0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp1aQ921W0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Chmp1aQ921W0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15□□□□□ -0.01
Chmp1aQ921W0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp1aQ921W0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp1aQ921W0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp1aQ921W0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15□□□□□ -0.01
Chmp1aQ921W0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Chmp1aQ921W0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15□□□□□ -0.01
Chmp1aQ921W0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Chmp1aQ921W0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp1aQ921W0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp1aQ921W0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp1aQ921W0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chmp1aQ921W0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1aQ921W0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1aQ921W0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1aQ921W0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Chmp1aQ921W0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1aQ921W0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1aQ921W0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1aQ921W0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1aQ921W0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1aQ921W0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.98□□□□□ -0.01
Chmp1aQ921W0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1aQ921W0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.98□□□□□ -0.01
Chmp1aQ921W0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1aQ921W0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1aQ921W0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.98□□□□□ -0.01
Chmp1aQ921W0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1aQ921W0 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.98□□□□□ -0.01
Chmp1aQ921W0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1aQ921W0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Chmp1aQ921W0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Chmp1aQ921W0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1aQ921W0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1aQ921W0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Zfp783-201ENSMUST00000095946 670 ntBASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.97□□□□□ -0.01
Chmp1aQ921W0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1aQ921W0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.96□□□□□ -0.01
Chmp1aQ921W0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1aQ921W0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1aQ921W0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1aQ921W0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1aQ921W0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1aQ921W0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Chmp1aQ921W0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1aQ921W0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1aQ921W0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Chmp1aQ921W0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1aQ921W0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms