Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Gm21559-201ENSMUST00000220638 855 ntBASIC17.83■□□□□ 0.44
Pcdha11Q91Y19 Gm8587-201ENSMUST00000076538 843 ntBASIC17.83■□□□□ 0.44
Pcdha11Q91Y19 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Pcdha11Q91Y19 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.83■□□□□ 0.44
Pcdha11Q91Y19 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha11Q91Y19 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.83■□□□□ 0.44
Pcdha11Q91Y19 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha11Q91Y19 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha11Q91Y19 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha11Q91Y19 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha11Q91Y19 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.83■□□□□ 0.44
Pcdha11Q91Y19 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha11Q91Y19 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Pcdha11Q91Y19 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Pcdha11Q91Y19 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha11Q91Y19 Gm23634-201ENSMUST00000175071 91 ntBASIC17.82■□□□□ 0.44
Pcdha11Q91Y19 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha11Q91Y19 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha11Q91Y19 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha11Q91Y19 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pcdha11Q91Y19 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha11Q91Y19 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha11Q91Y19 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha11Q91Y19 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.82■□□□□ 0.44
Pcdha11Q91Y19 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha11Q91Y19 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha11Q91Y19 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdha11Q91Y19 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha11Q91Y19 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Gm10566-201ENSMUST00000086739 996 ntBASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha11Q91Y19 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha11Q91Y19 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdha11Q91Y19 Actl10-202ENSMUST00000226583 1501 ntBASIC17.78■□□□□ 0.44
Pcdha11Q91Y19 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdha11Q91Y19 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms