Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha3Q91Y16 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.72■□□□□ 0.43
Pcdha3Q91Y16 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha3Q91Y16 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.72■□□□□ 0.43
Pcdha3Q91Y16 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdha3Q91Y16 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha3Q91Y16 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha3Q91Y16 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha3Q91Y16 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.72■□□□□ 0.43
Pcdha3Q91Y16 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha3Q91Y16 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha3Q91Y16 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdha3Q91Y16 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha3Q91Y16 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha3Q91Y16 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha3Q91Y16 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha3Q91Y16 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 Gm13836-201ENSMUST00000121159 501 ntBASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 Gm17661-201ENSMUST00000170317 270 ntBASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha3Q91Y16 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdha3Q91Y16 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdha3Q91Y16 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdha3Q91Y16 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.71■□□□□ 0.42
Pcdha3Q91Y16 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha3Q91Y16 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha3Q91Y16 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha3Q91Y16 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha3Q91Y16 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pcdha3Q91Y16 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdha3Q91Y16 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.7■□□□□ 0.42
Pcdha3Q91Y16 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha3Q91Y16 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha3Q91Y16 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdha3Q91Y16 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha3Q91Y16 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha3Q91Y16 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha3Q91Y16 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdha3Q91Y16 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha3Q91Y16 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha3Q91Y16 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.69■□□□□ 0.42
Pcdha3Q91Y16 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha3Q91Y16 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha3Q91Y16 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha3Q91Y16 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdha3Q91Y16 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha3Q91Y16 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha3Q91Y16 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.69■□□□□ 0.42
Pcdha3Q91Y16 Il3ra-202ENSMUST00000223589 738 ntBASIC17.69■□□□□ 0.42
Pcdha3Q91Y16 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pcdha3Q91Y16 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha3Q91Y16 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.69■□□□□ 0.42
Pcdha3Q91Y16 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha3Q91Y16 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Pcdha3Q91Y16 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha3Q91Y16 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha3Q91Y16 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha3Q91Y16 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Gm2274-201ENSMUST00000184539 609 ntBASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms