Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb1Q91Y08 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb1Q91Y08 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb1Q91Y08 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb1Q91Y08 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb1Q91Y08 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb1Q91Y08 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Pcdhb1Q91Y08 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdhb1Q91Y08 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdhb1Q91Y08 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.63■□□□□ 0.41
Pcdhb1Q91Y08 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb1Q91Y08 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb1Q91Y08 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb1Q91Y08 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb1Q91Y08 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Pcdhb1Q91Y08 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Pcdhb1Q91Y08 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb1Q91Y08 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb1Q91Y08 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb1Q91Y08 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb1Q91Y08 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb1Q91Y08 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb1Q91Y08 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb1Q91Y08 Gm27463-201ENSMUST00000183569 57 ntBASIC17.62■□□□□ 0.41
Pcdhb1Q91Y08 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.62■□□□□ 0.41
Pcdhb1Q91Y08 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb1Q91Y08 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb1Q91Y08 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb1Q91Y08 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb1Q91Y08 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb1Q91Y08 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.62■□□□□ 0.41
Pcdhb1Q91Y08 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 Gm10252-201ENSMUST00000209541 832 ntBASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb1Q91Y08 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb1Q91Y08 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb1Q91Y08 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhb1Q91Y08 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb1Q91Y08 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.6■□□□□ 0.41
Pcdhb1Q91Y08 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb1Q91Y08 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb1Q91Y08 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb1Q91Y08 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb1Q91Y08 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb1Q91Y08 Gm13216-201ENSMUST00000117145 591 ntBASIC17.6■□□□□ 0.41
Pcdhb1Q91Y08 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb1Q91Y08 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.6■□□□□ 0.41
Pcdhb1Q91Y08 Gm18958-201ENSMUST00000174258 762 ntBASIC17.6■□□□□ 0.41
Pcdhb1Q91Y08 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb1Q91Y08 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb1Q91Y08 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb1Q91Y08 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhb1Q91Y08 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb1Q91Y08 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Pcdhb1Q91Y08 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb1Q91Y08 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb1Q91Y08 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb1Q91Y08 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb1Q91Y08 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.59■□□□□ 0.41
Pcdhb1Q91Y08 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.59■□□□□ 0.41
Pcdhb1Q91Y08 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb1Q91Y08 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.59■□□□□ 0.41
Pcdhb1Q91Y08 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.59■□□□□ 0.41
Pcdhb1Q91Y08 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pcdhb1Q91Y08 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb1Q91Y08 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb1Q91Y08 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb1Q91Y08 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb1Q91Y08 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb1Q91Y08 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb1Q91Y08 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhb1Q91Y08 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb1Q91Y08 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb1Q91Y08 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb1Q91Y08 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb1Q91Y08 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhb1Q91Y08 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb1Q91Y08 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb1Q91Y08 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pcdhb1Q91Y08 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb1Q91Y08 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb1Q91Y08 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms