Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb3Q91XZ7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb3Q91XZ7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.97■□□□□ 0.31
Pcdhb3Q91XZ7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Rab3c-203ENSMUST00000224180 967 ntBASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb3Q91XZ7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb3Q91XZ7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb3Q91XZ7 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.96■□□□□ 0.3
Pcdhb3Q91XZ7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Pcdhb3Q91XZ7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb3Q91XZ7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb3Q91XZ7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb3Q91XZ7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb3Q91XZ7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb3Q91XZ7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.95■□□□□ 0.3
Pcdhb3Q91XZ7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb3Q91XZ7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.95■□□□□ 0.3
Pcdhb3Q91XZ7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.95■□□□□ 0.3
Pcdhb3Q91XZ7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.95■□□□□ 0.3
Pcdhb3Q91XZ7 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC16.95■□□□□ 0.3
Pcdhb3Q91XZ7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb3Q91XZ7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb3Q91XZ7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb3Q91XZ7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb3Q91XZ7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb3Q91XZ7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb3Q91XZ7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 Gm8520-201ENSMUST00000186517 868 ntBASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb3Q91XZ7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb3Q91XZ7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhb3Q91XZ7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb3Q91XZ7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb3Q91XZ7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb3Q91XZ7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb3Q91XZ7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhb3Q91XZ7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhb3Q91XZ7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhb3Q91XZ7 Gm22325-201ENSMUST00000158904 308 ntBASIC16.93■□□□□ 0.3
Pcdhb3Q91XZ7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.93■□□□□ 0.3
Pcdhb3Q91XZ7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb3Q91XZ7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Pcdhb3Q91XZ7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb3Q91XZ7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb3Q91XZ7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Pcdhb3Q91XZ7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb3Q91XZ7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb3Q91XZ7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb3Q91XZ7 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb3Q91XZ7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhb3Q91XZ7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb3Q91XZ7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhb3Q91XZ7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhb3Q91XZ7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb3Q91XZ7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdhb3Q91XZ7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb3Q91XZ7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb3Q91XZ7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb3Q91XZ7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Pcdhb3Q91XZ7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb3Q91XZ7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb3Q91XZ7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb3Q91XZ7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms