Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga11Q91XY8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga11Q91XY8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdhga11Q91XY8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga11Q91XY8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga11Q91XY8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga11Q91XY8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga11Q91XY8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga11Q91XY8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhga11Q91XY8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga11Q91XY8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga11Q91XY8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga11Q91XY8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga11Q91XY8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga11Q91XY8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdhga11Q91XY8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga11Q91XY8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga11Q91XY8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga11Q91XY8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga11Q91XY8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga11Q91XY8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga11Q91XY8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Pcdhga11Q91XY8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga11Q91XY8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga11Q91XY8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga11Q91XY8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Pcdhga11Q91XY8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga11Q91XY8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga11Q91XY8 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.37■□□□□ 0.21
Pcdhga11Q91XY8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga11Q91XY8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhga11Q91XY8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga11Q91XY8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhga11Q91XY8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhga11Q91XY8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga11Q91XY8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Pcdhga11Q91XY8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga11Q91XY8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhga11Q91XY8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 Gm24841-201ENSMUST00000158676 357 ntBASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga11Q91XY8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhga11Q91XY8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga11Q91XY8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga11Q91XY8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga11Q91XY8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga11Q91XY8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhga11Q91XY8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga11Q91XY8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga11Q91XY8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhga11Q91XY8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga11Q91XY8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga11Q91XY8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga11Q91XY8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga11Q91XY8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms