Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdhgb5Q91XX5 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.83■□□□□ 0.28
Pcdhgb5Q91XX5 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Pcdhgb5Q91XX5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb5Q91XX5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb5Q91XX5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb5Q91XX5 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb5Q91XX5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhgb5Q91XX5 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Pcdhgb5Q91XX5 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb5Q91XX5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb5Q91XX5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhgb5Q91XX5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb5Q91XX5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb5Q91XX5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb5Q91XX5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb5Q91XX5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb5Q91XX5 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb5Q91XX5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb5Q91XX5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb5Q91XX5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.81■□□□□ 0.28
Pcdhgb5Q91XX5 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.81■□□□□ 0.28
Pcdhgb5Q91XX5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhgb5Q91XX5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhgb5Q91XX5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb5Q91XX5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb5Q91XX5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb5Q91XX5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhgb5Q91XX5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb5Q91XX5 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb5Q91XX5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb5Q91XX5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Gm11336-201ENSMUST00000118168 334 ntBASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb5Q91XX5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Gm27000-201ENSMUST00000182943 842 ntBASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb5Q91XX5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms