Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc3Q91XX1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc3Q91XX1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc3Q91XX1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.04■□□□□ 0.16
Pcdhgc3Q91XX1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhgc3Q91XX1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhgc3Q91XX1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.04■□□□□ 0.16
Pcdhgc3Q91XX1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.04■□□□□ 0.16
Pcdhgc3Q91XX1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc3Q91XX1 Gm38285-201ENSMUST00000192928 922 ntBASIC16.04■□□□□ 0.16
Pcdhgc3Q91XX1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Pcdhgc3Q91XX1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdhgc3Q91XX1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc3Q91XX1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdhgc3Q91XX1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc3Q91XX1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc3Q91XX1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc3Q91XX1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc3Q91XX1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgc3Q91XX1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgc3Q91XX1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgc3Q91XX1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgc3Q91XX1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Pcdhgc3Q91XX1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgc3Q91XX1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgc3Q91XX1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgc3Q91XX1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pcdhgc3Q91XX1 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgc3Q91XX1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgc3Q91XX1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgc3Q91XX1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgc3Q91XX1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgc3Q91XX1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgc3Q91XX1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
Pcdhgc3Q91XX1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgc3Q91XX1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Pcdhgc3Q91XX1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgc3Q91XX1 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.02■□□□□ 0.15
Pcdhgc3Q91XX1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhgc3Q91XX1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhgc3Q91XX1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhgc3Q91XX1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhgc3Q91XX1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhgc3Q91XX1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhgc3Q91XX1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms