Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Lims2Q91XD2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lims2Q91XD2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.33■□□□□ 0.37
Lims2Q91XD2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lims2Q91XD2 Mir770-201ENSMUST00000103252 94 ntBASIC17.33■□□□□ 0.36
Lims2Q91XD2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lims2Q91XD2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.33■□□□□ 0.36
Lims2Q91XD2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.33■□□□□ 0.36
Lims2Q91XD2 Gm18421-201ENSMUST00000204122 625 ntBASIC17.33■□□□□ 0.36
Lims2Q91XD2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lims2Q91XD2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lims2Q91XD2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lims2Q91XD2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
Lims2Q91XD2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lims2Q91XD2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lims2Q91XD2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.32■□□□□ 0.36
Lims2Q91XD2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lims2Q91XD2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lims2Q91XD2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lims2Q91XD2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lims2Q91XD2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lims2Q91XD2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.31■□□□□ 0.36
Lims2Q91XD2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lims2Q91XD2 Gm17808-201ENSMUST00000200859 894 ntBASIC17.31■□□□□ 0.36
Lims2Q91XD2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lims2Q91XD2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Lims2Q91XD2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.31■□□□□ 0.36
Lims2Q91XD2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lims2Q91XD2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lims2Q91XD2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lims2Q91XD2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lims2Q91XD2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lims2Q91XD2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lims2Q91XD2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.3■□□□□ 0.36
Lims2Q91XD2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.3■□□□□ 0.36
Lims2Q91XD2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lims2Q91XD2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.3■□□□□ 0.36
Lims2Q91XD2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lims2Q91XD2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lims2Q91XD2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lims2Q91XD2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Lims2Q91XD2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lims2Q91XD2 Gm33142-201ENSMUST00000193913 867 ntBASIC17.3■□□□□ 0.36
Lims2Q91XD2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Lims2Q91XD2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Lims2Q91XD2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lims2Q91XD2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lims2Q91XD2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Lims2Q91XD2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Lims2Q91XD2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.3■□□□□ 0.36
Lims2Q91XD2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lims2Q91XD2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lims2Q91XD2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Lims2Q91XD2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lims2Q91XD2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lims2Q91XD2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Gm11950-201ENSMUST00000121615 838 ntBASIC17.29■□□□□ 0.36
Lims2Q91XD2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lims2Q91XD2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lims2Q91XD2 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms