Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb11Q91UZ8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb11Q91UZ8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb11Q91UZ8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb11Q91UZ8 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.38■□□□□ 0.37
Pcdhb11Q91UZ8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdhb11Q91UZ8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb11Q91UZ8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdhb11Q91UZ8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb11Q91UZ8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb11Q91UZ8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb11Q91UZ8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhb11Q91UZ8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb11Q91UZ8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb11Q91UZ8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb11Q91UZ8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb11Q91UZ8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb11Q91UZ8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb11Q91UZ8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhb11Q91UZ8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb11Q91UZ8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 Gm27000-201ENSMUST00000182943 842 ntBASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb11Q91UZ8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb11Q91UZ8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb11Q91UZ8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb11Q91UZ8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb11Q91UZ8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhb11Q91UZ8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb11Q91UZ8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb11Q91UZ8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pcdhb11Q91UZ8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Pcdhb11Q91UZ8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhb11Q91UZ8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhb11Q91UZ8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb11Q91UZ8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb11Q91UZ8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb11Q91UZ8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb11Q91UZ8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb11Q91UZ8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb11Q91UZ8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb11Q91UZ8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhb11Q91UZ8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb11Q91UZ8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb11Q91UZ8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb11Q91UZ8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb11Q91UZ8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb11Q91UZ8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb11Q91UZ8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.35■□□□□ 0.37
Pcdhb11Q91UZ8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb11Q91UZ8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb11Q91UZ8 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.35■□□□□ 0.37
Pcdhb11Q91UZ8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb11Q91UZ8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb11Q91UZ8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb11Q91UZ8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb11Q91UZ8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb11Q91UZ8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb11Q91UZ8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb11Q91UZ8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb11Q91UZ8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb11Q91UZ8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb11Q91UZ8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb11Q91UZ8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb11Q91UZ8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb11Q91UZ8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb11Q91UZ8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb11Q91UZ8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb11Q91UZ8 Gm7889-201ENSMUST00000185591 958 ntBASIC17.34■□□□□ 0.37
Pcdhb11Q91UZ8 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.34■□□□□ 0.37
Pcdhb11Q91UZ8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb11Q91UZ8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb11Q91UZ8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb11Q91UZ8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb11Q91UZ8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb11Q91UZ8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Pcdhb11Q91UZ8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb11Q91UZ8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb11Q91UZ8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.37
Pcdhb11Q91UZ8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb11Q91UZ8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms