Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim60Q8VI40 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim60Q8VI40 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim60Q8VI40 Gm37292-201ENSMUST00000192062 758 ntBASIC17.56■□□□□ 0.4
Trim60Q8VI40 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim60Q8VI40 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim60Q8VI40 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim60Q8VI40 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim60Q8VI40 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.56■□□□□ 0.4
Trim60Q8VI40 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim60Q8VI40 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim60Q8VI40 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim60Q8VI40 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim60Q8VI40 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim60Q8VI40 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim60Q8VI40 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim60Q8VI40 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim60Q8VI40 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim60Q8VI40 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim60Q8VI40 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.55■□□□□ 0.4
Trim60Q8VI40 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.55■□□□□ 0.4
Trim60Q8VI40 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim60Q8VI40 Gm10517-202ENSMUST00000192970 758 ntBASIC17.55■□□□□ 0.4
Trim60Q8VI40 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim60Q8VI40 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.55■□□□□ 0.4
Trim60Q8VI40 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim60Q8VI40 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.55■□□□□ 0.4
Trim60Q8VI40 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Trim60Q8VI40 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim60Q8VI40 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim60Q8VI40 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim60Q8VI40 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim60Q8VI40 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim60Q8VI40 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim60Q8VI40 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim60Q8VI40 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim60Q8VI40 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Gm24841-201ENSMUST00000158676 357 ntBASIC17.54■□□□□ 0.4
Trim60Q8VI40 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim60Q8VI40 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim60Q8VI40 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim60Q8VI40 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim60Q8VI40 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim60Q8VI40 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Trim60Q8VI40 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim60Q8VI40 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim60Q8VI40 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim60Q8VI40 Gm27275-201ENSMUST00000184318 272 ntBASIC17.53■□□□□ 0.4
Trim60Q8VI40 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim60Q8VI40 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim60Q8VI40 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim60Q8VI40 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim60Q8VI40 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim60Q8VI40 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim60Q8VI40 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim60Q8VI40 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.53■□□□□ 0.4
Trim60Q8VI40 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim60Q8VI40 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim60Q8VI40 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim60Q8VI40 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trim60Q8VI40 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim60Q8VI40 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim60Q8VI40 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Trim60Q8VI40 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim60Q8VI40 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.52■□□□□ 0.4
Trim60Q8VI40 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.52■□□□□ 0.4
Trim60Q8VI40 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.52■□□□□ 0.4
Trim60Q8VI40 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.52■□□□□ 0.4
Trim60Q8VI40 Gm37025-201ENSMUST00000195159 829 ntBASIC17.52■□□□□ 0.4
Trim60Q8VI40 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim60Q8VI40 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim60Q8VI40 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim60Q8VI40 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Trim60Q8VI40 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim60Q8VI40 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Trim60Q8VI40 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trim60Q8VI40 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim60Q8VI40 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Trim60Q8VI40 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim60Q8VI40 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms