Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx39aQ8VDW0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx39aQ8VDW0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx39aQ8VDW0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.84■□□□□ 0.61
Ddx39aQ8VDW0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.84■□□□□ 0.61
Ddx39aQ8VDW0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.84■□□□□ 0.61
Ddx39aQ8VDW0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx39aQ8VDW0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ddx39aQ8VDW0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx39aQ8VDW0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx39aQ8VDW0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx39aQ8VDW0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx39aQ8VDW0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx39aQ8VDW0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ddx39aQ8VDW0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ddx39aQ8VDW0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Ddx39aQ8VDW0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Ddx39aQ8VDW0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Ddx39aQ8VDW0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Ddx39aQ8VDW0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx39aQ8VDW0 Gm27741-201ENSMUST00000185060 237 ntBASIC18.83■□□□□ 0.6
Ddx39aQ8VDW0 Gm17807-201ENSMUST00000186869 298 ntBASIC18.83■□□□□ 0.6
Ddx39aQ8VDW0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.83■□□□□ 0.6
Ddx39aQ8VDW0 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.83■□□□□ 0.6
Ddx39aQ8VDW0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.83■□□□□ 0.6
Ddx39aQ8VDW0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx39aQ8VDW0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ddx39aQ8VDW0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx39aQ8VDW0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx39aQ8VDW0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx39aQ8VDW0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx39aQ8VDW0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx39aQ8VDW0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx39aQ8VDW0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx39aQ8VDW0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx39aQ8VDW0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx39aQ8VDW0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx39aQ8VDW0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx39aQ8VDW0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ddx39aQ8VDW0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx39aQ8VDW0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.82■□□□□ 0.6
Ddx39aQ8VDW0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.82■□□□□ 0.6
Ddx39aQ8VDW0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx39aQ8VDW0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx39aQ8VDW0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ddx39aQ8VDW0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx39aQ8VDW0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Ddx39aQ8VDW0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx39aQ8VDW0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx39aQ8VDW0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ddx39aQ8VDW0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx39aQ8VDW0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx39aQ8VDW0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx39aQ8VDW0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
Ddx39aQ8VDW0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx39aQ8VDW0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ddx39aQ8VDW0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.81■□□□□ 0.6
Ddx39aQ8VDW0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx39aQ8VDW0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ddx39aQ8VDW0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx39aQ8VDW0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ddx39aQ8VDW0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx39aQ8VDW0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx39aQ8VDW0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ddx39aQ8VDW0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx39aQ8VDW0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx39aQ8VDW0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx39aQ8VDW0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.79■□□□□ 0.6
Ddx39aQ8VDW0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ddx39aQ8VDW0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx39aQ8VDW0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx39aQ8VDW0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx39aQ8VDW0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx39aQ8VDW0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx39aQ8VDW0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms