Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ndc1Q8VCB1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ndc1Q8VCB1 Gm17661-201ENSMUST00000170317 270 ntBASIC16.01■□□□□ 0.15
Ndc1Q8VCB1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ndc1Q8VCB1 Gm6345-202ENSMUST00000180900 204 ntBASIC16.01■□□□□ 0.15
Ndc1Q8VCB1 Mir8112-201ENSMUST00000184382 131 ntBASIC16.01■□□□□ 0.15
Ndc1Q8VCB1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ndc1Q8VCB1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ndc1Q8VCB1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ndc1Q8VCB1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ndc1Q8VCB1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ndc1Q8VCB1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Ndc1Q8VCB1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ndc1Q8VCB1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ndc1Q8VCB1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ndc1Q8VCB1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ndc1Q8VCB1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ndc1Q8VCB1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ndc1Q8VCB1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ndc1Q8VCB1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ndc1Q8VCB1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ndc1Q8VCB1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ndc1Q8VCB1 Spsb2-203ENSMUST00000112473 1322 ntBASIC16■□□□□ 0.15
Ndc1Q8VCB1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ndc1Q8VCB1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16■□□□□ 0.15
Ndc1Q8VCB1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ndc1Q8VCB1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ndc1Q8VCB1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16■□□□□ 0.15
Ndc1Q8VCB1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ndc1Q8VCB1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ndc1Q8VCB1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ndc1Q8VCB1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ndc1Q8VCB1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ndc1Q8VCB1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ndc1Q8VCB1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ndc1Q8VCB1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ndc1Q8VCB1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16■□□□□ 0.15
Ndc1Q8VCB1 Gm43272-201ENSMUST00000200599 1584 ntBASIC16■□□□□ 0.15
Ndc1Q8VCB1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Ndc1Q8VCB1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ndc1Q8VCB1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndc1Q8VCB1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Ndc1Q8VCB1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndc1Q8VCB1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndc1Q8VCB1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.98■□□□□ 0.15
Ndc1Q8VCB1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ndc1Q8VCB1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndc1Q8VCB1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndc1Q8VCB1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndc1Q8VCB1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndc1Q8VCB1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndc1Q8VCB1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndc1Q8VCB1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.98■□□□□ 0.15
Ndc1Q8VCB1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndc1Q8VCB1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Ndc1Q8VCB1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Ndc1Q8VCB1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndc1Q8VCB1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndc1Q8VCB1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndc1Q8VCB1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndc1Q8VCB1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ndc1Q8VCB1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ndc1Q8VCB1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ndc1Q8VCB1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ndc1Q8VCB1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ndc1Q8VCB1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.97■□□□□ 0.15
Ndc1Q8VCB1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ndc1Q8VCB1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ndc1Q8VCB1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms