Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.99■□□□□ 0.31
Vps39Q8R5L3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.98■□□□□ 0.31
Vps39Q8R5L3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps39Q8R5L3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps39Q8R5L3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps39Q8R5L3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Vps39Q8R5L3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps39Q8R5L3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps39Q8R5L3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps39Q8R5L3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.97■□□□□ 0.31
Vps39Q8R5L3 Gm17661-201ENSMUST00000170317 270 ntBASIC16.97■□□□□ 0.31
Vps39Q8R5L3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.97■□□□□ 0.31
Vps39Q8R5L3 Gm20760-201ENSMUST00000179197 648 ntBASIC16.97■□□□□ 0.31
Vps39Q8R5L3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.97■□□□□ 0.31
Vps39Q8R5L3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps39Q8R5L3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps39Q8R5L3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps39Q8R5L3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps39Q8R5L3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vps39Q8R5L3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vps39Q8R5L3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps39Q8R5L3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps39Q8R5L3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps39Q8R5L3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps39Q8R5L3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps39Q8R5L3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps39Q8R5L3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Vps39Q8R5L3 Gm10698-201ENSMUST00000182663 604 ntBASIC16.96■□□□□ 0.31
Vps39Q8R5L3 Gm29257-201ENSMUST00000186115 639 ntBASIC16.96■□□□□ 0.31
Vps39Q8R5L3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps39Q8R5L3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vps39Q8R5L3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps39Q8R5L3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Vps39Q8R5L3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vps39Q8R5L3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Vps39Q8R5L3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps39Q8R5L3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps39Q8R5L3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps39Q8R5L3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps39Q8R5L3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.95■□□□□ 0.3
Vps39Q8R5L3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.95■□□□□ 0.3
Vps39Q8R5L3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.95■□□□□ 0.3
Vps39Q8R5L3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps39Q8R5L3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Vps39Q8R5L3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps39Q8R5L3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Vps39Q8R5L3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps39Q8R5L3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps39Q8R5L3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms