Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.29■□□□□ 0.84
Top1mtQ8R4U6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Top1mtQ8R4U6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Top1mtQ8R4U6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Top1mtQ8R4U6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Top1mtQ8R4U6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Top1mtQ8R4U6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Top1mtQ8R4U6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Top1mtQ8R4U6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Top1mtQ8R4U6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.28■□□□□ 0.84
Top1mtQ8R4U6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.28■□□□□ 0.84
Top1mtQ8R4U6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.28■□□□□ 0.84
Top1mtQ8R4U6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Top1mtQ8R4U6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Top1mtQ8R4U6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.28■□□□□ 0.84
Top1mtQ8R4U6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Top1mtQ8R4U6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Top1mtQ8R4U6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Top1mtQ8R4U6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Top1mtQ8R4U6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Top1mtQ8R4U6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Top1mtQ8R4U6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Top1mtQ8R4U6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Top1mtQ8R4U6 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Top1mtQ8R4U6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Top1mtQ8R4U6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Top1mtQ8R4U6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Top1mtQ8R4U6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.27■□□□□ 0.84
Top1mtQ8R4U6 Gm37055-201ENSMUST00000191866 133 ntBASIC20.27■□□□□ 0.84
Top1mtQ8R4U6 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.27■□□□□ 0.84
Top1mtQ8R4U6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Top1mtQ8R4U6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Top1mtQ8R4U6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Top1mtQ8R4U6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Top1mtQ8R4U6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.27■□□□□ 0.84
Top1mtQ8R4U6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Top1mtQ8R4U6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Top1mtQ8R4U6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Top1mtQ8R4U6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Top1mtQ8R4U6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Top1mtQ8R4U6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Top1mtQ8R4U6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Top1mtQ8R4U6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Top1mtQ8R4U6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Top1mtQ8R4U6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.26■□□□□ 0.83
Top1mtQ8R4U6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Top1mtQ8R4U6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Top1mtQ8R4U6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.26■□□□□ 0.83
Top1mtQ8R4U6 Gm27463-201ENSMUST00000183569 57 ntBASIC20.26■□□□□ 0.83
Top1mtQ8R4U6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Top1mtQ8R4U6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Top1mtQ8R4U6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Top1mtQ8R4U6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Top1mtQ8R4U6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Top1mtQ8R4U6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Top1mtQ8R4U6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Top1mtQ8R4U6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Top1mtQ8R4U6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Top1mtQ8R4U6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Top1mtQ8R4U6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Top1mtQ8R4U6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Top1mtQ8R4U6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Top1mtQ8R4U6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Top1mtQ8R4U6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Top1mtQ8R4U6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Top1mtQ8R4U6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Top1mtQ8R4U6 Gm18958-201ENSMUST00000174258 762 ntBASIC20.25■□□□□ 0.83
Top1mtQ8R4U6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Top1mtQ8R4U6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Top1mtQ8R4U6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Top1mtQ8R4U6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Top1mtQ8R4U6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Top1mtQ8R4U6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Top1mtQ8R4U6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Top1mtQ8R4U6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Top1mtQ8R4U6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Top1mtQ8R4U6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Top1mtQ8R4U6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Top1mtQ8R4U6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.24■□□□□ 0.83
Top1mtQ8R4U6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Top1mtQ8R4U6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Top1mtQ8R4U6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Top1mtQ8R4U6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Top1mtQ8R4U6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.24■□□□□ 0.83
Top1mtQ8R4U6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Top1mtQ8R4U6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Top1mtQ8R4U6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Top1mtQ8R4U6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.24■□□□□ 0.83
Top1mtQ8R4U6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Top1mtQ8R4U6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.24■□□□□ 0.83
Top1mtQ8R4U6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Top1mtQ8R4U6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Top1mtQ8R4U6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Top1mtQ8R4U6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Top1mtQ8R4U6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Top1mtQ8R4U6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Top1mtQ8R4U6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Top1mtQ8R4U6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Top1mtQ8R4U6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Top1mtQ8R4U6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms