Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmc1Q8R4P5 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmc1Q8R4P5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmc1Q8R4P5 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmc1Q8R4P5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmc1Q8R4P5 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tmc1Q8R4P5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmc1Q8R4P5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmc1Q8R4P5 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.75■□□□□ 0.91
Tmc1Q8R4P5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Tmc1Q8R4P5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmc1Q8R4P5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tmc1Q8R4P5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.75■□□□□ 0.91
Tmc1Q8R4P5 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmc1Q8R4P5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmc1Q8R4P5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC20.75■□□□□ 0.91
Tmc1Q8R4P5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmc1Q8R4P5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.75■□□□□ 0.91
Tmc1Q8R4P5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmc1Q8R4P5 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC20.74■□□□□ 0.91
Tmc1Q8R4P5 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Gm11249-201ENSMUST00000117071 859 ntBASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Mir6982-201ENSMUST00000184354 68 ntBASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Tmc1Q8R4P5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Gm11927-201ENSMUST00000118472 759 ntBASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Mir7071-201ENSMUST00000184847 69 ntBASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.72■□□□□ 0.91
Tmc1Q8R4P5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.71■□□□□ 0.91
Tmc1Q8R4P5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tmc1Q8R4P5 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tmc1Q8R4P5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tmc1Q8R4P5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tmc1Q8R4P5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tmc1Q8R4P5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tmc1Q8R4P5 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tmc1Q8R4P5 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tmc1Q8R4P5 Gm18666-201ENSMUST00000190039 958 ntBASIC20.71■□□□□ 0.91
Tmc1Q8R4P5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tmc1Q8R4P5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms