Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Ubqln1Q8R317 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ubqln1Q8R317 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ubqln1Q8R317 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ubqln1Q8R317 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.08■□□□□ 0.16
Ubqln1Q8R317 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubqln1Q8R317 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ubqln1Q8R317 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.07■□□□□ 0.16
Ubqln1Q8R317 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubqln1Q8R317 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ubqln1Q8R317 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubqln1Q8R317 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.07■□□□□ 0.16
Ubqln1Q8R317 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubqln1Q8R317 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ubqln1Q8R317 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubqln1Q8R317 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubqln1Q8R317 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubqln1Q8R317 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubqln1Q8R317 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ubqln1Q8R317 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubqln1Q8R317 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubqln1Q8R317 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ubqln1Q8R317 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubqln1Q8R317 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubqln1Q8R317 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Il3ra-202ENSMUST00000223589 738 ntBASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubqln1Q8R317 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Ubqln1Q8R317 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ubqln1Q8R317 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ubqln1Q8R317 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubqln1Q8R317 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubqln1Q8R317 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ubqln1Q8R317 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubqln1Q8R317 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ubqln1Q8R317 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubqln1Q8R317 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubqln1Q8R317 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubqln1Q8R317 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ubqln1Q8R317 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Ubqln1Q8R317 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubqln1Q8R317 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ubqln1Q8R317 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ubqln1Q8R317 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.04■□□□□ 0.16
Ubqln1Q8R317 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ubqln1Q8R317 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms