Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Sf3a1Q8K4Z5 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Sf3a1Q8K4Z5 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Sf3a1Q8K4Z5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Sf3a1Q8K4Z5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Sf3a1Q8K4Z5 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.75■□□□□ 0.91
Sf3a1Q8K4Z5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sf3a1Q8K4Z5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sf3a1Q8K4Z5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sf3a1Q8K4Z5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Sf3a1Q8K4Z5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sf3a1Q8K4Z5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.75■□□□□ 0.91
Sf3a1Q8K4Z5 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sf3a1Q8K4Z5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a1Q8K4Z5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a1Q8K4Z5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a1Q8K4Z5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a1Q8K4Z5 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a1Q8K4Z5 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a1Q8K4Z5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.74■□□□□ 0.91
Sf3a1Q8K4Z5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.74■□□□□ 0.91
Sf3a1Q8K4Z5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a1Q8K4Z5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Sf3a1Q8K4Z5 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a1Q8K4Z5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Sf3a1Q8K4Z5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Sf3a1Q8K4Z5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a1Q8K4Z5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a1Q8K4Z5 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a1Q8K4Z5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a1Q8K4Z5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Gm27000-201ENSMUST00000182943 842 ntBASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Gm18959-201ENSMUST00000208954 655 ntBASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sf3a1Q8K4Z5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Gm16061-201ENSMUST00000122167 857 ntBASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Gm18958-201ENSMUST00000174258 762 ntBASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.72■□□□□ 0.91
Sf3a1Q8K4Z5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sf3a1Q8K4Z5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sf3a1Q8K4Z5 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sf3a1Q8K4Z5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.71■□□□□ 0.91
Sf3a1Q8K4Z5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Sf3a1Q8K4Z5 Gm45058-201ENSMUST00000205810 766 ntBASIC20.71■□□□□ 0.91
Sf3a1Q8K4Z5 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.71■□□□□ 0.91
Sf3a1Q8K4Z5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sf3a1Q8K4Z5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sf3a1Q8K4Z5 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sf3a1Q8K4Z5 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sf3a1Q8K4Z5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Sf3a1Q8K4Z5 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sf3a1Q8K4Z5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sf3a1Q8K4Z5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.7■□□□□ 0.9
Sf3a1Q8K4Z5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.7■□□□□ 0.9
Sf3a1Q8K4Z5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.7■□□□□ 0.9
Sf3a1Q8K4Z5 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.7■□□□□ 0.9
Sf3a1Q8K4Z5 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sf3a1Q8K4Z5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.7■□□□□ 0.9
Sf3a1Q8K4Z5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Sf3a1Q8K4Z5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sf3a1Q8K4Z5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms