Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Cystm1Q8K353 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Gm37374-201ENSMUST00000194954 1829 ntBASIC10.67□□□□□ -0.7
Cystm1Q8K353 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Tgds-204ENSMUST00000228543 1594 ntBASIC10.66□□□□□ -0.7
Cystm1Q8K353 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Gm37912-201ENSMUST00000191895 3076 ntBASIC10.66□□□□□ -0.7
Cystm1Q8K353 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Gm38205-201ENSMUST00000192243 258 ntBASIC10.66□□□□□ -0.7
Cystm1Q8K353 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 AC121961.1-201ENSMUST00000218594 1779 ntBASIC10.66□□□□□ -0.7
Cystm1Q8K353 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cystm1Q8K353 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cystm1Q8K353 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC10.65□□□□□ -0.7
Cystm1Q8K353 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Gm12669-201ENSMUST00000122162 1009 ntBASIC10.65□□□□□ -0.7
Cystm1Q8K353 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cystm1Q8K353 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cystm1Q8K353 Gm8839-201ENSMUST00000121279 1645 ntBASIC10.65□□□□□ -0.7
Cystm1Q8K353 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
Cystm1Q8K353 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cystm1Q8K353 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cystm1Q8K353 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Cystm1Q8K353 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cystm1Q8K353 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Gm43352-201ENSMUST00000196419 3065 ntBASIC10.64□□□□□ -0.71
Cystm1Q8K353 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Gm10676-201ENSMUST00000098778 3221 ntBASIC10.64□□□□□ -0.71
Cystm1Q8K353 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Gm7860-201ENSMUST00000121190 879 ntBASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms