Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cchcr1Q8K2I2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cchcr1Q8K2I2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cchcr1Q8K2I2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cchcr1Q8K2I2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cchcr1Q8K2I2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cchcr1Q8K2I2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.04■□□□□ 0.8
Cchcr1Q8K2I2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cchcr1Q8K2I2 Gm9731-201ENSMUST00000209480 747 ntBASIC20.04■□□□□ 0.8
Cchcr1Q8K2I2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.04■□□□□ 0.8
Cchcr1Q8K2I2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.04■□□□□ 0.8
Cchcr1Q8K2I2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cchcr1Q8K2I2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Cchcr1Q8K2I2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cchcr1Q8K2I2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cchcr1Q8K2I2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cchcr1Q8K2I2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cchcr1Q8K2I2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cchcr1Q8K2I2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20.04■□□□□ 0.8
Cchcr1Q8K2I2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cchcr1Q8K2I2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cchcr1Q8K2I2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cchcr1Q8K2I2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cchcr1Q8K2I2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cchcr1Q8K2I2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cchcr1Q8K2I2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cchcr1Q8K2I2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cchcr1Q8K2I2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cchcr1Q8K2I2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cchcr1Q8K2I2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cchcr1Q8K2I2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cchcr1Q8K2I2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cchcr1Q8K2I2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cchcr1Q8K2I2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Cchcr1Q8K2I2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.02■□□□□ 0.79
Cchcr1Q8K2I2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cchcr1Q8K2I2 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.02■□□□□ 0.79
Cchcr1Q8K2I2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cchcr1Q8K2I2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.01■□□□□ 0.79
Cchcr1Q8K2I2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cchcr1Q8K2I2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cchcr1Q8K2I2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cchcr1Q8K2I2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cchcr1Q8K2I2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cchcr1Q8K2I2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cchcr1Q8K2I2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Cchcr1Q8K2I2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.01■□□□□ 0.79
Cchcr1Q8K2I2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cchcr1Q8K2I2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cchcr1Q8K2I2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cchcr1Q8K2I2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cchcr1Q8K2I2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cchcr1Q8K2I2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cchcr1Q8K2I2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cchcr1Q8K2I2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cchcr1Q8K2I2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cchcr1Q8K2I2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Cchcr1Q8K2I2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20■□□□□ 0.79
Cchcr1Q8K2I2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cchcr1Q8K2I2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cchcr1Q8K2I2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Cchcr1Q8K2I2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cchcr1Q8K2I2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cchcr1Q8K2I2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cchcr1Q8K2I2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Cchcr1Q8K2I2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cchcr1Q8K2I2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cchcr1Q8K2I2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cchcr1Q8K2I2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Cchcr1Q8K2I2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cchcr1Q8K2I2 Gm10653-202ENSMUST00000139570 835 ntBASIC19.99■□□□□ 0.79
Cchcr1Q8K2I2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cchcr1Q8K2I2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cchcr1Q8K2I2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.99■□□□□ 0.79
Cchcr1Q8K2I2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.99■□□□□ 0.79
Cchcr1Q8K2I2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.99■□□□□ 0.79
Cchcr1Q8K2I2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.99■□□□□ 0.79
Cchcr1Q8K2I2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.99■□□□□ 0.79
Cchcr1Q8K2I2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cchcr1Q8K2I2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms