Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rtn1Q8K0T0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Rtn1Q8K0T0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Rtn1Q8K0T0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn1Q8K0T0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn1Q8K0T0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn1Q8K0T0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn1Q8K0T0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn1Q8K0T0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn1Q8K0T0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rtn1Q8K0T0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn1Q8K0T0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn1Q8K0T0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn1Q8K0T0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn1Q8K0T0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn1Q8K0T0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn1Q8K0T0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.56■□□□□ 0.72
Rtn1Q8K0T0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn1Q8K0T0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn1Q8K0T0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn1Q8K0T0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn1Q8K0T0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn1Q8K0T0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn1Q8K0T0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.55■□□□□ 0.72
Rtn1Q8K0T0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn1Q8K0T0 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.55■□□□□ 0.72
Rtn1Q8K0T0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Rtn1Q8K0T0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Rtn1Q8K0T0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn1Q8K0T0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn1Q8K0T0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn1Q8K0T0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Rtn1Q8K0T0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Rtn1Q8K0T0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn1Q8K0T0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn1Q8K0T0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn1Q8K0T0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn1Q8K0T0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn1Q8K0T0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn1Q8K0T0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn1Q8K0T0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Rtn1Q8K0T0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
Rtn1Q8K0T0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.54■□□□□ 0.72
Rtn1Q8K0T0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Rtn1Q8K0T0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.54■□□□□ 0.72
Rtn1Q8K0T0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Rtn1Q8K0T0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn1Q8K0T0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn1Q8K0T0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn1Q8K0T0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn1Q8K0T0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn1Q8K0T0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rtn1Q8K0T0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn1Q8K0T0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn1Q8K0T0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn1Q8K0T0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rtn1Q8K0T0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn1Q8K0T0 Gm16061-201ENSMUST00000122167 857 ntBASIC19.53■□□□□ 0.72
Rtn1Q8K0T0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.53■□□□□ 0.72
Rtn1Q8K0T0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Rtn1Q8K0T0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn1Q8K0T0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn1Q8K0T0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.52■□□□□ 0.72
Rtn1Q8K0T0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn1Q8K0T0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn1Q8K0T0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn1Q8K0T0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn1Q8K0T0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.52■□□□□ 0.72
Rtn1Q8K0T0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn1Q8K0T0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn1Q8K0T0 Gm6433-201ENSMUST00000118634 875 ntBASIC19.52■□□□□ 0.72
Rtn1Q8K0T0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rtn1Q8K0T0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn1Q8K0T0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn1Q8K0T0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn1Q8K0T0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn1Q8K0T0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn1Q8K0T0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rtn1Q8K0T0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn1Q8K0T0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 400.4 ms