Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CopaQ8CIE6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CopaQ8CIE6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CopaQ8CIE6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CopaQ8CIE6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CopaQ8CIE6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CopaQ8CIE6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CopaQ8CIE6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CopaQ8CIE6 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.3■□□□□ 0.36
CopaQ8CIE6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CopaQ8CIE6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CopaQ8CIE6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CopaQ8CIE6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CopaQ8CIE6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CopaQ8CIE6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.3■□□□□ 0.36
CopaQ8CIE6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CopaQ8CIE6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CopaQ8CIE6 Gm38027-201ENSMUST00000192315 235 ntBASIC17.3■□□□□ 0.36
CopaQ8CIE6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CopaQ8CIE6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.3■□□□□ 0.36
CopaQ8CIE6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.3■□□□□ 0.36
CopaQ8CIE6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CopaQ8CIE6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CopaQ8CIE6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CopaQ8CIE6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CopaQ8CIE6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CopaQ8CIE6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CopaQ8CIE6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CopaQ8CIE6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CopaQ8CIE6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CopaQ8CIE6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CopaQ8CIE6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CopaQ8CIE6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.29■□□□□ 0.36
CopaQ8CIE6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CopaQ8CIE6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CopaQ8CIE6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CopaQ8CIE6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CopaQ8CIE6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CopaQ8CIE6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CopaQ8CIE6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CopaQ8CIE6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CopaQ8CIE6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.28■□□□□ 0.36
CopaQ8CIE6 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.28■□□□□ 0.36
CopaQ8CIE6 Gm4974-201ENSMUST00000209974 875 ntBASIC17.28■□□□□ 0.36
CopaQ8CIE6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.28■□□□□ 0.36
CopaQ8CIE6 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.28■□□□□ 0.36
CopaQ8CIE6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CopaQ8CIE6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CopaQ8CIE6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.28■□□□□ 0.36
CopaQ8CIE6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CopaQ8CIE6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CopaQ8CIE6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CopaQ8CIE6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CopaQ8CIE6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CopaQ8CIE6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CopaQ8CIE6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CopaQ8CIE6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.28■□□□□ 0.36
CopaQ8CIE6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CopaQ8CIE6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CopaQ8CIE6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CopaQ8CIE6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CopaQ8CIE6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CopaQ8CIE6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CopaQ8CIE6 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.27■□□□□ 0.36
CopaQ8CIE6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CopaQ8CIE6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CopaQ8CIE6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CopaQ8CIE6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CopaQ8CIE6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CopaQ8CIE6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CopaQ8CIE6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CopaQ8CIE6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.27■□□□□ 0.36
CopaQ8CIE6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CopaQ8CIE6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.27■□□□□ 0.36
CopaQ8CIE6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CopaQ8CIE6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.27■□□□□ 0.36
CopaQ8CIE6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CopaQ8CIE6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CopaQ8CIE6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.27■□□□□ 0.36
CopaQ8CIE6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CopaQ8CIE6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CopaQ8CIE6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CopaQ8CIE6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CopaQ8CIE6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CopaQ8CIE6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.27■□□□□ 0.35
CopaQ8CIE6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CopaQ8CIE6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CopaQ8CIE6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CopaQ8CIE6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CopaQ8CIE6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CopaQ8CIE6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CopaQ8CIE6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.26■□□□□ 0.35
CopaQ8CIE6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CopaQ8CIE6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.26■□□□□ 0.35
CopaQ8CIE6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CopaQ8CIE6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CopaQ8CIE6 Gm27463-201ENSMUST00000183569 57 ntBASIC17.26■□□□□ 0.35
CopaQ8CIE6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.26■□□□□ 0.35
CopaQ8CIE6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.26■□□□□ 0.35
CopaQ8CIE6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms