Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clip4Q8CI96 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clip4Q8CI96 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clip4Q8CI96 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.08■□□□□ 0.32
Clip4Q8CI96 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip4Q8CI96 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip4Q8CI96 Gm10418-201ENSMUST00000100943 576 ntBASIC17.08■□□□□ 0.32
Clip4Q8CI96 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Clip4Q8CI96 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Clip4Q8CI96 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Clip4Q8CI96 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.08■□□□□ 0.32
Clip4Q8CI96 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.08■□□□□ 0.32
Clip4Q8CI96 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip4Q8CI96 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip4Q8CI96 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clip4Q8CI96 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip4Q8CI96 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip4Q8CI96 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip4Q8CI96 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip4Q8CI96 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip4Q8CI96 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip4Q8CI96 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip4Q8CI96 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clip4Q8CI96 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clip4Q8CI96 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clip4Q8CI96 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.07■□□□□ 0.32
Clip4Q8CI96 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clip4Q8CI96 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clip4Q8CI96 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clip4Q8CI96 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clip4Q8CI96 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clip4Q8CI96 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.07■□□□□ 0.32
Clip4Q8CI96 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clip4Q8CI96 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Clip4Q8CI96 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.07■□□□□ 0.32
Clip4Q8CI96 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.07■□□□□ 0.32
Clip4Q8CI96 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clip4Q8CI96 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.07■□□□□ 0.32
Clip4Q8CI96 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clip4Q8CI96 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Clip4Q8CI96 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.07■□□□□ 0.32
Clip4Q8CI96 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clip4Q8CI96 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clip4Q8CI96 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clip4Q8CI96 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clip4Q8CI96 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clip4Q8CI96 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clip4Q8CI96 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clip4Q8CI96 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Clip4Q8CI96 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clip4Q8CI96 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.05■□□□□ 0.32
Clip4Q8CI96 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clip4Q8CI96 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clip4Q8CI96 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clip4Q8CI96 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clip4Q8CI96 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Clip4Q8CI96 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clip4Q8CI96 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clip4Q8CI96 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clip4Q8CI96 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clip4Q8CI96 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.04■□□□□ 0.32
Clip4Q8CI96 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clip4Q8CI96 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clip4Q8CI96 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.04■□□□□ 0.32
Clip4Q8CI96 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clip4Q8CI96 Gm21814-202ENSMUST00000203277 873 ntBASIC17.04■□□□□ 0.32
Clip4Q8CI96 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clip4Q8CI96 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clip4Q8CI96 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clip4Q8CI96 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Clip4Q8CI96 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Clip4Q8CI96 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms