Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rp1l1Q8CGM2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rp1l1Q8CGM2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rp1l1Q8CGM2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rp1l1Q8CGM2 Auts2-212ENSMUST00000178555 309 ntBASIC17.63■□□□□ 0.41
Rp1l1Q8CGM2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.63■□□□□ 0.41
Rp1l1Q8CGM2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rp1l1Q8CGM2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rp1l1Q8CGM2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rp1l1Q8CGM2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rp1l1Q8CGM2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rp1l1Q8CGM2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Rp1l1Q8CGM2 Gm24513-201ENSMUST00000174964 138 ntBASIC17.63■□□□□ 0.41
Rp1l1Q8CGM2 Gm27628-201ENSMUST00000184911 107 ntBASIC17.63■□□□□ 0.41
Rp1l1Q8CGM2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rp1l1Q8CGM2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rp1l1Q8CGM2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rp1l1Q8CGM2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rp1l1Q8CGM2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rp1l1Q8CGM2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rp1l1Q8CGM2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.62■□□□□ 0.41
Rp1l1Q8CGM2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Rp1l1Q8CGM2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.62■□□□□ 0.41
Rp1l1Q8CGM2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rp1l1Q8CGM2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Rp1l1Q8CGM2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rp1l1Q8CGM2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rp1l1Q8CGM2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Rp1l1Q8CGM2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rp1l1Q8CGM2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rp1l1Q8CGM2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rp1l1Q8CGM2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rp1l1Q8CGM2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rp1l1Q8CGM2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rp1l1Q8CGM2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 Gm13418-201ENSMUST00000119097 944 ntBASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rp1l1Q8CGM2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rp1l1Q8CGM2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rp1l1Q8CGM2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rp1l1Q8CGM2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.6■□□□□ 0.41
Rp1l1Q8CGM2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.6■□□□□ 0.41
Rp1l1Q8CGM2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.6■□□□□ 0.41
Rp1l1Q8CGM2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.6■□□□□ 0.41
Rp1l1Q8CGM2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rp1l1Q8CGM2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rp1l1Q8CGM2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rp1l1Q8CGM2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rp1l1Q8CGM2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rp1l1Q8CGM2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rp1l1Q8CGM2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rp1l1Q8CGM2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rp1l1Q8CGM2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.59■□□□□ 0.41
Rp1l1Q8CGM2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Rp1l1Q8CGM2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.59■□□□□ 0.41
Rp1l1Q8CGM2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rp1l1Q8CGM2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rp1l1Q8CGM2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rp1l1Q8CGM2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rp1l1Q8CGM2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rp1l1Q8CGM2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rp1l1Q8CGM2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rp1l1Q8CGM2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rp1l1Q8CGM2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rp1l1Q8CGM2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rp1l1Q8CGM2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rp1l1Q8CGM2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rp1l1Q8CGM2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.58■□□□□ 0.41
Rp1l1Q8CGM2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.58■□□□□ 0.41
Rp1l1Q8CGM2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.58■□□□□ 0.41
Rp1l1Q8CGM2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
Rp1l1Q8CGM2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rp1l1Q8CGM2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.58■□□□□ 0.41
Rp1l1Q8CGM2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rp1l1Q8CGM2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rp1l1Q8CGM2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rp1l1Q8CGM2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rp1l1Q8CGM2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rp1l1Q8CGM2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rp1l1Q8CGM2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rp1l1Q8CGM2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms