Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Smc4Q8CG47 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc4Q8CG47 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Smc4Q8CG47 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Smc4Q8CG47 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc4Q8CG47 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smc4Q8CG47 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc4Q8CG47 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smc4Q8CG47 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc4Q8CG47 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc4Q8CG47 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc4Q8CG47 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smc4Q8CG47 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.9■□□□□ 0.94
Smc4Q8CG47 Gm17808-201ENSMUST00000200859 894 ntBASIC20.9■□□□□ 0.94
Smc4Q8CG47 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc4Q8CG47 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.9■□□□□ 0.94
Smc4Q8CG47 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc4Q8CG47 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Smc4Q8CG47 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.9■□□□□ 0.94
Smc4Q8CG47 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Smc4Q8CG47 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.9■□□□□ 0.94
Smc4Q8CG47 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc4Q8CG47 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smc4Q8CG47 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smc4Q8CG47 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smc4Q8CG47 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smc4Q8CG47 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.89■□□□□ 0.94
Smc4Q8CG47 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc4Q8CG47 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc4Q8CG47 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc4Q8CG47 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Smc4Q8CG47 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc4Q8CG47 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Smc4Q8CG47 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc4Q8CG47 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc4Q8CG47 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc4Q8CG47 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Smc4Q8CG47 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc4Q8CG47 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc4Q8CG47 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Smc4Q8CG47 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc4Q8CG47 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc4Q8CG47 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.88■□□□□ 0.93
Smc4Q8CG47 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc4Q8CG47 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc4Q8CG47 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc4Q8CG47 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smc4Q8CG47 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Smc4Q8CG47 Gm13186-201ENSMUST00000118031 316 ntBASIC20.88■□□□□ 0.93
Smc4Q8CG47 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smc4Q8CG47 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Smc4Q8CG47 Gm6623-201ENSMUST00000173570 544 ntBASIC20.88■□□□□ 0.93
Smc4Q8CG47 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.88■□□□□ 0.93
Smc4Q8CG47 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Smc4Q8CG47 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc4Q8CG47 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc4Q8CG47 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc4Q8CG47 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smc4Q8CG47 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc4Q8CG47 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Smc4Q8CG47 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc4Q8CG47 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc4Q8CG47 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Smc4Q8CG47 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smc4Q8CG47 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smc4Q8CG47 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc4Q8CG47 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Smc4Q8CG47 Gm11950-201ENSMUST00000121615 838 ntBASIC20.87■□□□□ 0.93
Smc4Q8CG47 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.87■□□□□ 0.93
Smc4Q8CG47 Gm7284-201ENSMUST00000131667 944 ntBASIC20.87■□□□□ 0.93
Smc4Q8CG47 Gm27704-201ENSMUST00000185094 107 ntBASIC20.87■□□□□ 0.93
Smc4Q8CG47 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Smc4Q8CG47 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smc4Q8CG47 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc4Q8CG47 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smc4Q8CG47 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smc4Q8CG47 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Smc4Q8CG47 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smc4Q8CG47 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc4Q8CG47 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Smc4Q8CG47 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc4Q8CG47 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Smc4Q8CG47 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.86■□□□□ 0.93
Smc4Q8CG47 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc4Q8CG47 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.86■□□□□ 0.93
Smc4Q8CG47 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.86■□□□□ 0.93
Smc4Q8CG47 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc4Q8CG47 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc4Q8CG47 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc4Q8CG47 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc4Q8CG47 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc4Q8CG47 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc4Q8CG47 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smc4Q8CG47 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.85■□□□□ 0.93
Smc4Q8CG47 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc4Q8CG47 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.85■□□□□ 0.93
Smc4Q8CG47 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smc4Q8CG47 Gm11336-201ENSMUST00000118168 334 ntBASIC20.85■□□□□ 0.93
Smc4Q8CG47 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.85■□□□□ 0.93
Smc4Q8CG47 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms