Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc5Q8CG46 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc5Q8CG46 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc5Q8CG46 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc5Q8CG46 Gm37025-201ENSMUST00000195159 829 ntBASIC20.99■□□□□ 0.95
Smc5Q8CG46 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.99■□□□□ 0.95
Smc5Q8CG46 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc5Q8CG46 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc5Q8CG46 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.99■□□□□ 0.95
Smc5Q8CG46 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smc5Q8CG46 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc5Q8CG46 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc5Q8CG46 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.98■□□□□ 0.95
Smc5Q8CG46 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc5Q8CG46 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc5Q8CG46 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc5Q8CG46 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc5Q8CG46 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.98■□□□□ 0.95
Smc5Q8CG46 Gm18666-201ENSMUST00000190039 958 ntBASIC20.98■□□□□ 0.95
Smc5Q8CG46 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc5Q8CG46 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc5Q8CG46 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.98■□□□□ 0.95
Smc5Q8CG46 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smc5Q8CG46 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc5Q8CG46 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smc5Q8CG46 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smc5Q8CG46 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Smc5Q8CG46 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc5Q8CG46 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Smc5Q8CG46 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc5Q8CG46 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc5Q8CG46 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smc5Q8CG46 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
Smc5Q8CG46 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC20.97■□□□□ 0.95
Smc5Q8CG46 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smc5Q8CG46 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc5Q8CG46 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Smc5Q8CG46 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc5Q8CG46 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc5Q8CG46 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc5Q8CG46 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc5Q8CG46 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc5Q8CG46 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc5Q8CG46 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smc5Q8CG46 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc5Q8CG46 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Smc5Q8CG46 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc5Q8CG46 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Smc5Q8CG46 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Smc5Q8CG46 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc5Q8CG46 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Smc5Q8CG46 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc5Q8CG46 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc5Q8CG46 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc5Q8CG46 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc5Q8CG46 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Smc5Q8CG46 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Smc5Q8CG46 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc5Q8CG46 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc5Q8CG46 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc5Q8CG46 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Smc5Q8CG46 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc5Q8CG46 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc5Q8CG46 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc5Q8CG46 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Smc5Q8CG46 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Smc5Q8CG46 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Smc5Q8CG46 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
Smc5Q8CG46 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc5Q8CG46 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smc5Q8CG46 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc5Q8CG46 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc5Q8CG46 Gm12527-201ENSMUST00000117967 564 ntBASIC20.95■□□□□ 0.94
Smc5Q8CG46 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.95■□□□□ 0.94
Smc5Q8CG46 Gm37856-201ENSMUST00000191634 999 ntBASIC20.95■□□□□ 0.94
Smc5Q8CG46 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smc5Q8CG46 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc5Q8CG46 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
Smc5Q8CG46 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc5Q8CG46 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc5Q8CG46 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc5Q8CG46 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc5Q8CG46 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc5Q8CG46 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc5Q8CG46 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc5Q8CG46 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc5Q8CG46 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Smc5Q8CG46 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc5Q8CG46 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc5Q8CG46 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc5Q8CG46 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.94■□□□□ 0.94
Smc5Q8CG46 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc5Q8CG46 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smc5Q8CG46 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc5Q8CG46 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc5Q8CG46 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc5Q8CG46 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc5Q8CG46 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc5Q8CG46 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc5Q8CG46 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms