Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb7Q8CDY9 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.04■□□□□ 0.32
Pcdhb7Q8CDY9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pcdhb7Q8CDY9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb7Q8CDY9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb7Q8CDY9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb7Q8CDY9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb7Q8CDY9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.04■□□□□ 0.32
Pcdhb7Q8CDY9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb7Q8CDY9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb7Q8CDY9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb7Q8CDY9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb7Q8CDY9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pcdhb7Q8CDY9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb7Q8CDY9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb7Q8CDY9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb7Q8CDY9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb7Q8CDY9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb7Q8CDY9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb7Q8CDY9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb7Q8CDY9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb7Q8CDY9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb7Q8CDY9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb7Q8CDY9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb7Q8CDY9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Pcdhb7Q8CDY9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb7Q8CDY9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb7Q8CDY9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.02■□□□□ 0.32
Pcdhb7Q8CDY9 Gm22240-201ENSMUST00000175225 82 ntBASIC17.02■□□□□ 0.32
Pcdhb7Q8CDY9 Gm27011-201ENSMUST00000182352 972 ntBASIC17.02■□□□□ 0.32
Pcdhb7Q8CDY9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb7Q8CDY9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Pcdhb7Q8CDY9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb7Q8CDY9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb7Q8CDY9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb7Q8CDY9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb7Q8CDY9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb7Q8CDY9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb7Q8CDY9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb7Q8CDY9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.01■□□□□ 0.31
Pcdhb7Q8CDY9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb7Q8CDY9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb7Q8CDY9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb7Q8CDY9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.01■□□□□ 0.31
Pcdhb7Q8CDY9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb7Q8CDY9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Pcdhb7Q8CDY9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb7Q8CDY9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb7Q8CDY9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdhb7Q8CDY9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb7Q8CDY9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.01■□□□□ 0.31
Pcdhb7Q8CDY9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb7Q8CDY9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb7Q8CDY9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb7Q8CDY9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb7Q8CDY9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb7Q8CDY9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 Gm19721-201ENSMUST00000195284 1764 ntBASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 AC154649.1-201ENSMUST00000227392 384 ntBASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms