Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc3Q8CCH2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc3Q8CCH2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nhlrc3Q8CCH2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
Nhlrc3Q8CCH2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc3Q8CCH2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc3Q8CCH2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc3Q8CCH2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc3Q8CCH2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc3Q8CCH2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc3Q8CCH2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.29□□□□□ -0.12
Nhlrc3Q8CCH2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.29□□□□□ -0.12
Nhlrc3Q8CCH2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc3Q8CCH2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc3Q8CCH2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc3Q8CCH2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc3Q8CCH2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc3Q8CCH2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc3Q8CCH2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nhlrc3Q8CCH2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc3Q8CCH2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc3Q8CCH2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nhlrc3Q8CCH2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nhlrc3Q8CCH2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.27□□□□□ -0.12
Nhlrc3Q8CCH2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Nhlrc3Q8CCH2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nhlrc3Q8CCH2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nhlrc3Q8CCH2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nhlrc3Q8CCH2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nhlrc3Q8CCH2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nhlrc3Q8CCH2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nhlrc3Q8CCH2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nhlrc3Q8CCH2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nhlrc3Q8CCH2 Gm13158-201ENSMUST00000122007 736 ntBASIC14.27□□□□□ -0.13
Nhlrc3Q8CCH2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.27□□□□□ -0.13
Nhlrc3Q8CCH2 Gm18025-201ENSMUST00000221733 862 ntBASIC14.27□□□□□ -0.13
Nhlrc3Q8CCH2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.27□□□□□ -0.13
Nhlrc3Q8CCH2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nhlrc3Q8CCH2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nhlrc3Q8CCH2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Nhlrc3Q8CCH2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nhlrc3Q8CCH2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nhlrc3Q8CCH2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nhlrc3Q8CCH2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nhlrc3Q8CCH2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nhlrc3Q8CCH2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Gm42545-201ENSMUST00000202755 922 ntBASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nhlrc3Q8CCH2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms