Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.74■□□□□ 0.75
Vps53Q8CCB4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps53Q8CCB4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Vps53Q8CCB4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps53Q8CCB4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps53Q8CCB4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Vps53Q8CCB4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps53Q8CCB4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Vps53Q8CCB4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.74■□□□□ 0.75
Vps53Q8CCB4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps53Q8CCB4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Vps53Q8CCB4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps53Q8CCB4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps53Q8CCB4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps53Q8CCB4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vps53Q8CCB4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vps53Q8CCB4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps53Q8CCB4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps53Q8CCB4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Vps53Q8CCB4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps53Q8CCB4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Vps53Q8CCB4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps53Q8CCB4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vps53Q8CCB4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.73■□□□□ 0.75
Vps53Q8CCB4 Gm27463-201ENSMUST00000183569 57 ntBASIC19.73■□□□□ 0.75
Vps53Q8CCB4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Vps53Q8CCB4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps53Q8CCB4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps53Q8CCB4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Vps53Q8CCB4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Vps53Q8CCB4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps53Q8CCB4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps53Q8CCB4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps53Q8CCB4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps53Q8CCB4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps53Q8CCB4 Gm10013-201ENSMUST00000106074 672 ntBASIC19.72■□□□□ 0.75
Vps53Q8CCB4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps53Q8CCB4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.72■□□□□ 0.75
Vps53Q8CCB4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps53Q8CCB4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps53Q8CCB4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps53Q8CCB4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps53Q8CCB4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps53Q8CCB4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps53Q8CCB4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps53Q8CCB4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps53Q8CCB4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps53Q8CCB4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Vps53Q8CCB4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps53Q8CCB4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Gm45058-201ENSMUST00000205810 766 ntBASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Vps53Q8CCB4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vps53Q8CCB4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps53Q8CCB4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps53Q8CCB4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps53Q8CCB4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.7■□□□□ 0.74
Vps53Q8CCB4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps53Q8CCB4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps53Q8CCB4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vps53Q8CCB4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.7■□□□□ 0.74
Vps53Q8CCB4 Gm18032-201ENSMUST00000222541 538 ntBASIC19.7■□□□□ 0.74
Vps53Q8CCB4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.7■□□□□ 0.74
Vps53Q8CCB4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps53Q8CCB4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps53Q8CCB4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps53Q8CCB4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Vps53Q8CCB4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.7■□□□□ 0.74
Vps53Q8CCB4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps53Q8CCB4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps53Q8CCB4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps53Q8CCB4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps53Q8CCB4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps53Q8CCB4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps53Q8CCB4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Vps53Q8CCB4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps53Q8CCB4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vps53Q8CCB4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps53Q8CCB4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Vps53Q8CCB4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.69■□□□□ 0.74
Vps53Q8CCB4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms