Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shisa4Q8CA71 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shisa4Q8CA71 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shisa4Q8CA71 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shisa4Q8CA71 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shisa4Q8CA71 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shisa4Q8CA71 AA414768-201ENSMUST00000121924 1257 ntBASIC19.72■□□□□ 0.75
Shisa4Q8CA71 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shisa4Q8CA71 Gm44450-201ENSMUST00000199528 114 ntBASIC19.72■□□□□ 0.75
Shisa4Q8CA71 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.72■□□□□ 0.75
Shisa4Q8CA71 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.72■□□□□ 0.75
Shisa4Q8CA71 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shisa4Q8CA71 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shisa4Q8CA71 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
Shisa4Q8CA71 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shisa4Q8CA71 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shisa4Q8CA71 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shisa4Q8CA71 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shisa4Q8CA71 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.71■□□□□ 0.75
Shisa4Q8CA71 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shisa4Q8CA71 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shisa4Q8CA71 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shisa4Q8CA71 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shisa4Q8CA71 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shisa4Q8CA71 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shisa4Q8CA71 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shisa4Q8CA71 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shisa4Q8CA71 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shisa4Q8CA71 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shisa4Q8CA71 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shisa4Q8CA71 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shisa4Q8CA71 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shisa4Q8CA71 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shisa4Q8CA71 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shisa4Q8CA71 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shisa4Q8CA71 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Shisa4Q8CA71 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shisa4Q8CA71 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shisa4Q8CA71 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shisa4Q8CA71 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shisa4Q8CA71 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shisa4Q8CA71 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shisa4Q8CA71 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shisa4Q8CA71 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shisa4Q8CA71 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shisa4Q8CA71 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Shisa4Q8CA71 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shisa4Q8CA71 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
Shisa4Q8CA71 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.7■□□□□ 0.74
Shisa4Q8CA71 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shisa4Q8CA71 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shisa4Q8CA71 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shisa4Q8CA71 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.7■□□□□ 0.74
Shisa4Q8CA71 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shisa4Q8CA71 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shisa4Q8CA71 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shisa4Q8CA71 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shisa4Q8CA71 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shisa4Q8CA71 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Shisa4Q8CA71 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shisa4Q8CA71 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.69■□□□□ 0.74
Shisa4Q8CA71 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Shisa4Q8CA71 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shisa4Q8CA71 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.69■□□□□ 0.74
Shisa4Q8CA71 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.69■□□□□ 0.74
Shisa4Q8CA71 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shisa4Q8CA71 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shisa4Q8CA71 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shisa4Q8CA71 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Shisa4Q8CA71 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shisa4Q8CA71 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shisa4Q8CA71 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shisa4Q8CA71 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shisa4Q8CA71 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.69■□□□□ 0.74
Shisa4Q8CA71 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shisa4Q8CA71 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shisa4Q8CA71 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Shisa4Q8CA71 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.68■□□□□ 0.74
Shisa4Q8CA71 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shisa4Q8CA71 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shisa4Q8CA71 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Shisa4Q8CA71 Gm37722-201ENSMUST00000193757 208 ntBASIC19.68■□□□□ 0.74
Shisa4Q8CA71 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shisa4Q8CA71 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shisa4Q8CA71 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.67■□□□□ 0.74
Shisa4Q8CA71 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa4Q8CA71 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa4Q8CA71 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa4Q8CA71 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Shisa4Q8CA71 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa4Q8CA71 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa4Q8CA71 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa4Q8CA71 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa4Q8CA71 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa4Q8CA71 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.67■□□□□ 0.74
Shisa4Q8CA71 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa4Q8CA71 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa4Q8CA71 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa4Q8CA71 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shisa4Q8CA71 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 158.1 ms