Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.32■□□□□ 0.2
Slc46a2Q8CA03 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a2Q8CA03 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a2Q8CA03 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a2Q8CA03 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a2Q8CA03 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a2Q8CA03 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.31■□□□□ 0.2
Slc46a2Q8CA03 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a2Q8CA03 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Slc46a2Q8CA03 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a2Q8CA03 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.31■□□□□ 0.2
Slc46a2Q8CA03 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Slc46a2Q8CA03 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a2Q8CA03 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a2Q8CA03 Gm10138-203ENSMUST00000206952 366 ntBASIC16.31■□□□□ 0.2
Slc46a2Q8CA03 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.31■□□□□ 0.2
Slc46a2Q8CA03 Gm10602-201ENSMUST00000098239 609 ntBASIC16.31■□□□□ 0.2
Slc46a2Q8CA03 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a2Q8CA03 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc46a2Q8CA03 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a2Q8CA03 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a2Q8CA03 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Slc46a2Q8CA03 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a2Q8CA03 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a2Q8CA03 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a2Q8CA03 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Slc46a2Q8CA03 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Slc46a2Q8CA03 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a2Q8CA03 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a2Q8CA03 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a2Q8CA03 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.3■□□□□ 0.2
Slc46a2Q8CA03 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.3■□□□□ 0.2
Slc46a2Q8CA03 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a2Q8CA03 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a2Q8CA03 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Slc46a2Q8CA03 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a2Q8CA03 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a2Q8CA03 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a2Q8CA03 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc46a2Q8CA03 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc46a2Q8CA03 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Slc46a2Q8CA03 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a2Q8CA03 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a2Q8CA03 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a2Q8CA03 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.28■□□□□ 0.2
Slc46a2Q8CA03 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a2Q8CA03 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a2Q8CA03 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a2Q8CA03 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Slc46a2Q8CA03 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a2Q8CA03 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.28■□□□□ 0.2
Slc46a2Q8CA03 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a2Q8CA03 Rab3c-203ENSMUST00000224180 967 ntBASIC16.28■□□□□ 0.2
Slc46a2Q8CA03 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a2Q8CA03 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a2Q8CA03 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a2Q8CA03 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Slc46a2Q8CA03 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a2Q8CA03 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc46a2Q8CA03 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Slc46a2Q8CA03 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc46a2Q8CA03 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Slc46a2Q8CA03 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc46a2Q8CA03 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Slc46a2Q8CA03 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc46a2Q8CA03 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc46a2Q8CA03 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc46a2Q8CA03 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Slc46a2Q8CA03 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc46a2Q8CA03 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.27■□□□□ 0.2
Slc46a2Q8CA03 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc46a2Q8CA03 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Slc46a2Q8CA03 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc46a2Q8CA03 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc46a2Q8CA03 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc46a2Q8CA03 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc46a2Q8CA03 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.27■□□□□ 0.19
Slc46a2Q8CA03 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Slc46a2Q8CA03 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms