Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 Gm10602-201ENSMUST00000098239 609 ntBASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Gm13158-201ENSMUST00000122007 736 ntBASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx6Q8C7R7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Gm42545-201ENSMUST00000202755 922 ntBASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rfx6Q8C7R7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Gm18025-201ENSMUST00000221733 862 ntBASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx6Q8C7R7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx6Q8C7R7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.22■□□□□ 0.35
Rfx6Q8C7R7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rfx6Q8C7R7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx6Q8C7R7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx6Q8C7R7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx6Q8C7R7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.22■□□□□ 0.35
Rfx6Q8C7R7 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.22■□□□□ 0.35
Rfx6Q8C7R7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx6Q8C7R7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx6Q8C7R7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms