Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap54Q8C6S9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Gm6296-201ENSMUST00000222599 943 ntBASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap54Q8C6S9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap54Q8C6S9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.22■□□□□ 0.19
Cfap54Q8C6S9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.22■□□□□ 0.19
Cfap54Q8C6S9 Gm11336-201ENSMUST00000118168 334 ntBASIC16.22■□□□□ 0.19
Cfap54Q8C6S9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cfap54Q8C6S9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap54Q8C6S9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cfap54Q8C6S9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cfap54Q8C6S9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cfap54Q8C6S9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap54Q8C6S9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap54Q8C6S9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap54Q8C6S9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap54Q8C6S9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Cfap54Q8C6S9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.22■□□□□ 0.19
Cfap54Q8C6S9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap54Q8C6S9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap54Q8C6S9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap54Q8C6S9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Cfap54Q8C6S9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cfap54Q8C6S9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Cfap54Q8C6S9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cfap54Q8C6S9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cfap54Q8C6S9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cfap54Q8C6S9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cfap54Q8C6S9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.21■□□□□ 0.19
Cfap54Q8C6S9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cfap54Q8C6S9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cfap54Q8C6S9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms