Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp44Q8C2S0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.84■□□□□ 0.77
Usp44Q8C2S0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp44Q8C2S0 Gm13216-201ENSMUST00000117145 591 ntBASIC19.84■□□□□ 0.77
Usp44Q8C2S0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp44Q8C2S0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp44Q8C2S0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.84■□□□□ 0.77
Usp44Q8C2S0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp44Q8C2S0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Usp44Q8C2S0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp44Q8C2S0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Usp44Q8C2S0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Usp44Q8C2S0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.83■□□□□ 0.77
Usp44Q8C2S0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp44Q8C2S0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp44Q8C2S0 Phf7-203ENSMUST00000226565 1971 ntBASIC19.83■□□□□ 0.77
Usp44Q8C2S0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Usp44Q8C2S0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp44Q8C2S0 Mir1668-201ENSMUST00000184114 107 ntBASIC19.83■□□□□ 0.77
Usp44Q8C2S0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Usp44Q8C2S0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp44Q8C2S0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp44Q8C2S0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp44Q8C2S0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp44Q8C2S0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp44Q8C2S0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp44Q8C2S0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp44Q8C2S0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp44Q8C2S0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp44Q8C2S0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp44Q8C2S0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Usp44Q8C2S0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp44Q8C2S0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Usp44Q8C2S0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp44Q8C2S0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Usp44Q8C2S0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp44Q8C2S0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.82■□□□□ 0.76
Usp44Q8C2S0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
Usp44Q8C2S0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Usp44Q8C2S0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Usp44Q8C2S0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp44Q8C2S0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp44Q8C2S0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp44Q8C2S0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.82■□□□□ 0.76
Usp44Q8C2S0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp44Q8C2S0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp44Q8C2S0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp44Q8C2S0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.81■□□□□ 0.76
Usp44Q8C2S0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp44Q8C2S0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.81■□□□□ 0.76
Usp44Q8C2S0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp44Q8C2S0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Usp44Q8C2S0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Usp44Q8C2S0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Usp44Q8C2S0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Usp44Q8C2S0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp44Q8C2S0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Usp44Q8C2S0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.81■□□□□ 0.76
Usp44Q8C2S0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Usp44Q8C2S0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Usp44Q8C2S0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp44Q8C2S0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp44Q8C2S0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp44Q8C2S0 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.81■□□□□ 0.76
Usp44Q8C2S0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp44Q8C2S0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp44Q8C2S0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp44Q8C2S0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Usp44Q8C2S0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp44Q8C2S0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Usp44Q8C2S0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp44Q8C2S0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp44Q8C2S0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp44Q8C2S0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp44Q8C2S0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp44Q8C2S0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Usp44Q8C2S0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.79■□□□□ 0.76
Usp44Q8C2S0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms