Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim35Q8C006 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim35Q8C006 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim35Q8C006 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trim35Q8C006 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim35Q8C006 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.57■□□□□ 0.4
Trim35Q8C006 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Gm5133-201ENSMUST00000118940 1255 ntBASIC17.57■□□□□ 0.4
Trim35Q8C006 Gm13158-201ENSMUST00000122007 736 ntBASIC17.57■□□□□ 0.4
Trim35Q8C006 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC17.57■□□□□ 0.4
Trim35Q8C006 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim35Q8C006 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.57■□□□□ 0.4
Trim35Q8C006 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.57■□□□□ 0.4
Trim35Q8C006 AC147628.1-201ENSMUST00000228193 688 ntBASIC17.57■□□□□ 0.4
Trim35Q8C006 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trim35Q8C006 Zfp783-201ENSMUST00000095946 670 ntBASIC17.57■□□□□ 0.4
Trim35Q8C006 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim35Q8C006 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim35Q8C006 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim35Q8C006 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim35Q8C006 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim35Q8C006 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim35Q8C006 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim35Q8C006 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim35Q8C006 Timm21-201ENSMUST00000025547 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim35Q8C006 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim35Q8C006 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim35Q8C006 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trim35Q8C006 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim35Q8C006 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim35Q8C006 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim35Q8C006 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.56■□□□□ 0.4
Trim35Q8C006 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trim35Q8C006 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim35Q8C006 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim35Q8C006 Gm10812-201ENSMUST00000099864 546 ntBASIC17.56■□□□□ 0.4
Trim35Q8C006 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim35Q8C006 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Trim35Q8C006 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim35Q8C006 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim35Q8C006 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim35Q8C006 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim35Q8C006 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim35Q8C006 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim35Q8C006 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim35Q8C006 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim35Q8C006 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim35Q8C006 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim35Q8C006 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim35Q8C006 Gm11834-201ENSMUST00000122257 585 ntBASIC17.55■□□□□ 0.4
Trim35Q8C006 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim35Q8C006 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.55■□□□□ 0.4
Trim35Q8C006 Gm28180-201ENSMUST00000189608 722 ntBASIC17.55■□□□□ 0.4
Trim35Q8C006 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim35Q8C006 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim35Q8C006 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim35Q8C006 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim35Q8C006 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim35Q8C006 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim35Q8C006 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim35Q8C006 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim35Q8C006 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim35Q8C006 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim35Q8C006 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim35Q8C006 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim35Q8C006 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim35Q8C006 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim35Q8C006 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.54■□□□□ 0.4
Trim35Q8C006 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim35Q8C006 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim35Q8C006 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim35Q8C006 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim35Q8C006 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim35Q8C006 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trim35Q8C006 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim35Q8C006 AC172027.1-201ENSMUST00000217659 337 ntBASIC17.54■□□□□ 0.4
Trim35Q8C006 Gm18026-201ENSMUST00000222789 727 ntBASIC17.54■□□□□ 0.4
Trim35Q8C006 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trim35Q8C006 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.54■□□□□ 0.4
Trim35Q8C006 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim35Q8C006 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms