Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sh3rf2Q8BZT2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf2Q8BZT2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf2Q8BZT2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf2Q8BZT2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf2Q8BZT2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf2Q8BZT2 Gm11336-201ENSMUST00000118168 334 ntBASIC17.18■□□□□ 0.34
Sh3rf2Q8BZT2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sh3rf2Q8BZT2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sh3rf2Q8BZT2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf2Q8BZT2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf2Q8BZT2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf2Q8BZT2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf2Q8BZT2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf2Q8BZT2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3rf2Q8BZT2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sh3rf2Q8BZT2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.18■□□□□ 0.34
Sh3rf2Q8BZT2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf2Q8BZT2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf2Q8BZT2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf2Q8BZT2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Sh3rf2Q8BZT2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Sh3rf2Q8BZT2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.17■□□□□ 0.34
Sh3rf2Q8BZT2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Sh3rf2Q8BZT2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf2Q8BZT2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf2Q8BZT2 Gm13186-201ENSMUST00000118031 316 ntBASIC17.17■□□□□ 0.34
Sh3rf2Q8BZT2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Sh3rf2Q8BZT2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf2Q8BZT2 Gm45328-201ENSMUST00000210942 917 ntBASIC17.17■□□□□ 0.34
Sh3rf2Q8BZT2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf2Q8BZT2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf2Q8BZT2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf2Q8BZT2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Sh3rf2Q8BZT2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf2Q8BZT2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3rf2Q8BZT2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Gm28033-201ENSMUST00000184224 96 ntBASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Gm27742-201ENSMUST00000184667 60 ntBASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Gm8969-201ENSMUST00000199694 526 ntBASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Phf7-203ENSMUST00000226565 1971 ntBASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3rf2Q8BZT2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Gm18669-201ENSMUST00000216049 778 ntBASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.15■□□□□ 0.34
Sh3rf2Q8BZT2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms