Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne3Q8BT60 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne3Q8BT60 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne3Q8BT60 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.4■□□□□ 0.22
Cpne3Q8BT60 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne3Q8BT60 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne3Q8BT60 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.4■□□□□ 0.22
Cpne3Q8BT60 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.4■□□□□ 0.22
Cpne3Q8BT60 Gm37856-201ENSMUST00000191634 999 ntBASIC16.4■□□□□ 0.22
Cpne3Q8BT60 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.4■□□□□ 0.22
Cpne3Q8BT60 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne3Q8BT60 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne3Q8BT60 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cpne3Q8BT60 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne3Q8BT60 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Cpne3Q8BT60 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne3Q8BT60 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne3Q8BT60 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne3Q8BT60 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne3Q8BT60 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne3Q8BT60 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Gm37292-201ENSMUST00000192062 758 ntBASIC16.39■□□□□ 0.21
Cpne3Q8BT60 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne3Q8BT60 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne3Q8BT60 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.38■□□□□ 0.21
Cpne3Q8BT60 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne3Q8BT60 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne3Q8BT60 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne3Q8BT60 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne3Q8BT60 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne3Q8BT60 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne3Q8BT60 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.38■□□□□ 0.21
Cpne3Q8BT60 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.38■□□□□ 0.21
Cpne3Q8BT60 Gm4974-201ENSMUST00000209974 875 ntBASIC16.38■□□□□ 0.21
Cpne3Q8BT60 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne3Q8BT60 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cpne3Q8BT60 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne3Q8BT60 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne3Q8BT60 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne3Q8BT60 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne3Q8BT60 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne3Q8BT60 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne3Q8BT60 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne3Q8BT60 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne3Q8BT60 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne3Q8BT60 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne3Q8BT60 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne3Q8BT60 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cpne3Q8BT60 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.37■□□□□ 0.21
Cpne3Q8BT60 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne3Q8BT60 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.37■□□□□ 0.21
Cpne3Q8BT60 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne3Q8BT60 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne3Q8BT60 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cpne3Q8BT60 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne3Q8BT60 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne3Q8BT60 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne3Q8BT60 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne3Q8BT60 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne3Q8BT60 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne3Q8BT60 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Gm12527-201ENSMUST00000117967 564 ntBASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Gm10517-202ENSMUST00000192970 758 ntBASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne3Q8BT60 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms